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Research Article

Published in: New Biotechnology

Exploring simultaneous production of poly(3-hydroxybutyrate) and exopolysaccharides in cyanobacteria-rich microbiomes

Beatriz Altamira-Algarra, Joan García, Cristiana Torres, Maria Reis, Eva Gonzalez-Flo

Part of: Harnessing the power of nature through PROductive MIcrobial CONsortia in biotechnology - measure, model, master

10.1016/j.nbt.2025.02.008

25-07-2025

Unique: 0 | Total: 0 | Access Period:

Published in: Arpha Preprints

ERGA-BGE genome of Coenonympha oedippus: an IUCN endangered European butterfly species occurring in two ecotypes

Tatjana Čelik, Tjaša Lokovšek, Elena Bužan, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Marta Gut, Laura Aguilera, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler S Alioto, Leanne Haggerty, Swati Sinha, Fergal Martin, Chiara Bortoluzzi

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e155925

15-04-2025

Unique: 12 | Total: 17 | Access Period:

Published in: Arpha Preprints

ERGA-BGE genome of Cheirolophus tagananensis: an IUCN endangered shrub endemic to the Canary Islands

Jaume Pellicer, Teresa Garnatje, Daniel Vitales, Oriane Hidalgo, Joan Vallès, Alfredo García-Fernández, Arnoldo Santos-Guerra, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Wellcome Sanger Institute Tree of Life Management Samples and Laboratory Team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics Team, Abitha Thomas, Benjamin Jackson, Jonathan MD Wood, Kerstin Howe, Mark Blaxter, Shane McCarthy, Leanne Haggerty, Swati Sinha, Fergal Martin, Chiara Bortoluzzi

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e155484

11-04-2025

Unique: 16 | Total: 19 | Access Period:

Published in: Arpha Preprints

ERGA-BGE Reference Genome of the Western Montpellier Snake (Malpolon monspessulanus), a Key Species for Evolutionary and Venom Studies

Salvador Carranza, Daniel Fernández-Guiberteau, Laura Blasón, Rosa Fernández, Rita Monteiro, Astrid Böhne, Laura Aguilera, Marta Gut, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler Alioto, Leanne Haggerty, Swati Sinha, Fergal Martin, Diego De Panis

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e155085

08-04-2025

Unique: 18 | Total: 23 | Access Period:

Published in: Arpha Preprints

ERGA-BGE Reference Genome of the Northern chamois (Rupicapra rupicapra): Europe’s most abundant mountain ungulate

Elena Buzan, Aja Bončina, Boštjan Pokorny, Nuria Escudero, Rosa Fernández, Astrid Böhne, Rita Monteiro, Laura Aguilera, Marta Gut, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler Alioto, Leanne Haggerty, Fergal Martin, Diego De Panis

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e154801

04-04-2025

Unique: 25 | Total: 31 | Access Period:

Published in: Arpha Preprints

ERGA-BGE Reference Genome of the Striped Field Mouse (Apodemus agrarius), a Widespread and Abundant Species in Central and Eastern Europe

Franc Janžekovič, Elena Buzan, Aja Bončina, Nuria Escudero, Rosa Fernández, Astrid Böhne, Rita Monteiro, Laura Aguilera, Marta Gut, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Tyler Alioto, Leanne Haggerty, Fergal Martin, Diego De Panis

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e154773

04-04-2025

Unique: 23 | Total: 29 | Access Period:

Published in: Arpha Preprints

ERGA-BGE genome of Pinctada radiata (Leach, 1814): one of the first Lessepsian migrants

Katerina Vasileiadou, Tereza Manousaki, Thanos Dailianis, Grigorios Skouradakis, Emmanouela Vernadou, Danae Karakasi, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Genoscope Sequencing Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Lola Demirdjian, Benjamin Istace, Arnaud Couloux, Patrick Wincker, Pedro H Oliveira, Jean-Marc Aury, Leanne Haggerty, Swati Sinha, Fergal Martin, Chiara Bortoluzzi

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e154462

01-04-2025

Unique: 21 | Total: 30 | Access Period:

Published in: Arpha Preprints

ERGA-BGE genome of Noah's Ark shell (Arca noae Linnaeus, 1758), a Mediterranean bivalve species

Katerina Vasileiadou, Tereza Manousaki, Thanos Dailianis, Grigorios Skouradakis, Emmanouela Vernadou, Danae Karakasi, Astrid Böhne, Rita Monteiro, Rosa Fernández, Nuria Escudero, Genoscope Sequencing Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Lola Demirdjian, Emilie Téodori, Simone Duprat, Patrick Wincker, Pedro H Oliveira, Jean-Marc Aury, Leanne Haggerty, Swati Sinha, Fergal Martin, Chiara Bortoluzzi

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e154439

01-04-2025

Unique: 22 | Total: 25 | Access Period:

Data Paper (Generic)

Published in: Data in Brief

One-hectare fine-scale dataset of a fynbos plant community in the Cape Floristic Region

Jan-Hendrik Keet, Cang Hui

Part of: B-Cubed – Biodiversity Building Blocks for Policy

10.1016/j.dib.2025.111334

01-04-2025

Unique: 0 | Total: 0 | Access Period:

Published in: Arpha Preprints

ERGA-BGE genome of Acomys minous (Bate, 1906): the Crete spiny mouse, endemic to the island of Crete, Greece

Petros Lymberakis, Danae Karakasi, Manolis Papadimitrakis, Rita Monteiro, Astrid Böhne, Rosa Fernández, Nuria Escudero, Genoscope Sequencing Technical Team, Alice Moussy, Corinne Cruaud, Karine Labadie, Sophie Mangenot, Caroline Belser, Lola Demirdjian, Swati Sinha, Leanne Haggerty, Fergal Martin, Patrick Wincker, Pedro H. Oliveira, Tom Brown

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e153920

26-03-2025

Unique: 32 | Total: 39 | Access Period:

Published in: Arpha Preprints

ERGA-BGE genome of Valencia hispanica (Valenciennes, 1826): a critically endangered Iberian toothcarp

Marc Ventura, Nati Franch, Rosa Fernández, Javier Palma-Guerrero, Astrid Böhne, Rita Monteiro, Laura Aguilera, Marta Gut, Tyler S Alioto, Francisco Câmara Ferreira, Fernando Cruz, Jèssica Gómez-Garrido, Leanne Haggerty, Fergal Martin, Tom Brown

Part of: The European Reference Genome Atlas (ERGA) Community Genome Reports

10.3897/arphapreprints.e152862

13-03-2025

Unique: 25 | Total: 35 | Access Period:

Research Article

Published in: Metabolic Engineering

Exploring and increased acetate biosynthesis in Synechocystis PCC 6803 through insertion of a heterologous phosphoketolase and overexpressing phosphotransacetylase

Stamatina Roussou, Minmin Pan, Jens Krömer, Peter Lindblad

Part of: Harnessing the power of nature through PROductive MIcrobial CONsortia in biotechnology - measure, model, master

10.1016/j.ymben.2025.01.008

01-03-2025

Unique: 0 | Total: 0 | Access Period:

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