Research Ideas and Outcomes :
Grant Proposal
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Corresponding author: Dimitrios Koureas (dimitris.koureas@naturalis.nl)
Received: 04 Jan 2024 | Published: 08 Jan 2024
© 2024 Dimitrios Koureas, Laurence Livermore, Wouter Addink, Eva Alonso, Jose Alonso, Ana Casino, François Dusoulier, Vânia Ferreira, Jonas Grieb, Quentin Groom, Sharif Islam, Urmas Kõljalg, Gaël Lymer, Karol Marhold, Carole Paleco, Stefaan Pijls, Serge Scory, Ben Scott, Claus Weiland, Katharine Worley
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Koureas D, Livermore L, Addink W, Alonso E, Alonso JM, Casino A, Dusoulier F, Ferreira V, Grieb J, Groom Q, Islam S, Kõljalg U, Lymer G, Marhold K, Paleco C, Pijls S, Scory S, Scott B, Weiland C, Worley K (2024) DiSSCo Transition Abridged Grant Proposal. Research Ideas and Outcomes 10: e118241. https://doi.org/10.3897/rio.10.e118241
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The Distributed System of Scientific Collections (DiSSCo) is a pan-European Research Infrastructure (RI) initiative. DiSSCo aims to bring together natural science collections from 175 museums, botanical gardens, universities and research institutes across 23 countries in a distributed infrastructure that makes these collections physically and digitally open and accessible for all forms of research and innovation. DiSSCo RI entered the ESFRI roadmap in 2018 and successfully concluded its Preparatory Phase in early 2023. The RI is now transitioning towards the constitution of its legal entity (an ERIC) and the start of its scaled-up construction (implementation) programme. This publication is an abridged version of the successful grant proposal for the DiSSCo Transition Project which has the goal of ensuring the seamless transition of the DiSSCo RI from its Preparatory Phase to the Construction Phase (expected to start in 2025). In this transition period, the Project will address five objectives building on the outcomes of the Preparatory Phase project:
1) Advance the DiSSCo ERIC process and complete its policy framework, ensuring the smooth early-phase Implementation of DISSCo;
2) Engage & support DiSSCo National Nodes to strengthen national commitments;
3) Advance the development of core e-services to avoid the accumulation of technical debt before the start of the Implementation Phase;
4) Continue international collaboration on standards & best practices needed for the DiSSCo service provision; and
5) Continue supporting DiSSCo RI interim governance bodies and transition them to the DiSSCo ERIC formal governance.
The Project’s impact will be measured against the increase in the RI's overall Implementation Readiness Level (IRL). More specifically, we will monitor its impact towards reaching the required level of maturity in four of the five dimensions of the IRL that can benefit from further developments. These include the organisational, financial, technological and data readiness levels.
natural science collections, natural history collections, research infrastructure, global natural science, digitisation, data standards, Distributed System of Scientific Collections, DiSSCo, Digital Specimen Architecture, FAIR Data Ecosystem, FAIR digital objects
† The Project coordinator.
This paper is an abridged version of the original proposal which was submitted in March 2023. It contains the overarching scientific case for DiSSCo Transition, alongside a description of our major activities. Differences between this paper and the full “Description of Work” include redactions of financial and personal information alongside our risk analysis; inclusion of additional citations that could not be included in the original proposal due to space limitations; minor edits to improve readability; and the inclusion of higher resolution versions of the figures. The abridged proposal is published here to frame the publication of future outputs from DiSSCo Transition.
The Distributed System of Scientific Collections (DiSSCo) is a pan-European Research Infrastructure (RI) initiative. DiSSCo aims to bring together natural science collections from 175 museums, botanical gardens and universities across 23 countries in a distributed infrastructure that makes these collections physically and digitally open and accessible for all forms of research and innovation. DiSSCo leverages data, expertise and capacity of its distributed facilities, collections and human capital to deliver new cohesive user services (Fig.
Value proposition of DiSSCo RI in relation to specific needs of its primary user community (geo- and biodiversity).
Challenge addressed | How DiSSCo responds |
Taxonomic expertise across our local collections is declining. | A community curation model that is able to share expert resources across locations, transforming institutionally restricted curation to a collaborative community model. |
Digitisation investments are scattered and uncoordinated. | A pan-European digitisation programme that ensures effective scientifically driven prioritisation of content mobilisation across all European assets. |
Trust in digital evidence is declining because of quality concerns. | Re-unification of all data classes derived from the study of collection objects and provision of unified access to the digital twins of physical specimens, along with extended provenance information. |
Physical, remote and virtual access to collections is disconnected. | An orchestrated multi-modal access programme for European collections. |
Collections development is fragmented, and investment decisions are taken based only on institutional or national gaps. | Services that allow a strategic and data-driven understanding of the taxonomic and geographic gaps in biodiversity and geodiversity surveying and related European wide policies that would enable for a pan-European collections development programme. |
Data deriving from the study of vouchered specimens is disconnected. | A new concept—the digital extended specimen—is at the core of the data architecture of DiSSCo. The digital extended specimen is an enhanced digital twin of a physical specimen. They act as human-readable and machine-actionable knowledge units that integrate all data from studying the physical object. |
The use of collection-derived information in scientific outputs is poorly monitored. | The deployment of a persistent identifier system for digital specimens will facilitate the tracking of individual specimens across scientific publications. |
Citizens often feel disconnected from science, which threatens trust in scientific results. | DiSSCo assists in (re-)connecting citizens with science by providing engaging data with cultural and scientific value and provides an infrastructure that promotes citizen scientist participation. |
DiSSCo entered the European Strategy Forum for Research Infrastructures (ESFRI) roadmap in 2018. This achievement signalled the recognition of DiSSCo as a priority infrastructure for the European Research Area and it was the result of the long-standing collaboration between members of the network of European museums (the Consortium of European Taxonomic Facilities - CETAF). Ultimately, the ambition for DiSSCo is to obtain the status of a European Research Infrastructure Consortium (ERIC), a legal form that facilitates the establishment and operation of the RI. Developing an ERIC, in the context of the ESFRI, typically goes through a series of distinct yet highly interdependent phases (Fig.
The Preparatory Phase of DiSSCo was implemented through a complex programme of EU-funded and institutionally funded projects (Table
Projects that directly contributed to the Preparatory Phase of DiSSCo and increased the Implementation Readiness Level of the RI.
Project | Duration | Scope in relation to DiSSCo | Funding source |
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DiSSCo Prepare ( |
2019 - 2023 | Carried out key tasks across all IRL dimensions. | EU |
SYNTHESYS+ ( |
2018 - 2023 | Develop physical and virtual remote access models and early development of services and standards. | EU |
MOBILISE | 2018 - 2023 | Community engagement and capacity building. | EU/COST Action |
DiSSCo CSO project | 2018 - ongoing | Programme coordination/support to governance. | Internally funded |
The Transition Phase is defined as the time between the end of the Preparatory Phase and the start of the Construction Phase. The latter can only start once the RI legal entity is in place and member-state funding becomes available. The main goal during this transitional period is to ensure the formation of the ERIC legal entity as a prerequisite for receiving financial contributions from European governments. For DiSSCo, we expect establishing the legal status of ERIC in Q1 of 2025 (Fig.
The goal of the DiSSCo Transition Project is to ensure the seamless transition of the DiSSCo RI from the Preparatory Phase to the Construction Phase. In this Project, we will carry out specific tasks, informed by the DiSSCo Construction Masterplan (CMP), the final deliverable of the DiSSCo Prepare Project (
During the DiSSCo Preparatory Phase and specifically through the work done in the DiSSCo Prepare Project, the DiSSCo community developed the organisational and legal framework in which the DiSSCo RI can grow and operate. This included commissioning a study to: identify the most suitable long-term legal entity (an ERIC), prepare an early draft of the ERIC statutes (
During the Transition phase, we will continue to build on the developed corpus of technical documents to complete and consolidate the process for the formal submission to the European Commission of Step 1 and Step 2 application for an ERIC. We will support the work of the DiSSCo Funders Forum Advisory Board (FF) (formed by ministerial representatives from prospective member states) in their negotiations to reach a consensus and complete the legal and technical documentation required for the ERIC establishment. We will develop the documents required for the early days of the DiSSCo ERIC, including the implementing rules and policies. The above will also enable the transition from the RI’s interim governance to the ERIC's new formal governance.
During the DiSSCo Preparatory Phase, the participation of institutions and the engagement of National Nodes was done through regular meetings, providing a platform to channel and support their formal commitment towards the RI. This allowed us to capture detailed information on the different needs of the Nodes when developing DiSSCo. These needs included costing, training resources and research priorities. The National Nodes have proven to be an effective channel for aggregating institutional data and tailor narratives for their respective governmental funding agencies.
The second objective will focus on developing the participation of the National Nodes through two approaches:
During DiSSCo Transition, this dual approach will be further used to support the formal commitment of National Nodes to the DiSSCo ERIC, and to establish the path for engaging with future DiSSCo ERIC partners. Comprehensive information about the DiSSCo process will be shared through informative workshops and the identification of mechanisms and tools that will support decision-making at the national level.
Two work packages*
The development of e-services in the Project will focus on connecting fundamental end-user services with core infrastructure components. This creates an integrated data infrastructure, aligned with the DiSSCo DMP and with the standards developed in WP4.
Data Standards are fundamental tools that, when universally implemented, ensure systems and data interoperability. Especially for biodiversity information, the application of community Standards (such as Darwin Core*
During the Preparatory Phase of DiSSCo we established a series of governance bodies. Collectively they ensured the optimum implementation of the DiSSCo Preparatory Phase programme (Table
Definitions of the different dimensions of the overall Implementation Readiness Level (IRL) of DiSSCo.
Dimension | Definition | |
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Scientific Readiness | SR | Capacity of the RI to respond/adjust to current and anticipated user needs |
Data Readiness | DR |
Capacity of the RI data producers and stewards, across the distributed facilities, to serve FAIR and enriched data |
Technological Readiness | TR | Capacity of the RI to meet the functional requirements of its user audience through comprehensive and sustainable technological solutions |
Financial Readiness | FR | Capacity of the RI to put in place and implement a comprehensive business model |
Organisational Readiness | OR | Capacity of the RI to set and implement fit-for-purpose governance and management policies as well as strategic and operational plans |
Building on the results of the previous projects
The Project’s work plan is based on the recommendations of the DiSSCo Construction Masterplan (CMP). The CMP represents the compilation of all the outcomes of the DiSSCo Prepare Project and the collective effort and inputs of DiSSCo-related projects (Table
Complementarity to other projects
DiSSCo RI is involved in other EU-funded projects that invest in networking, research or innovation activities. The outputs of these projects are crucial for the success of the infrastructure. As such, we anticipate that we will be able to integrate results from these projects before or during the Construction phase of DiSSCo. Specifically, the following projects and their outputs will be considered:
The Biodiversity Digital Twin (BioDT) Project
The Biodiversity Digital Twin for Advanced Modelling, Simulation and Prediction Capabilities (2022-2025 https://biodt.eu
ENVRI FAIR Project
ENVRI FAIR (2019-2023 https://envri.eu/home-envri-fair
The Biodiversity Genomics Europe (BGE) Project
The Biodiversity Genomics Europe (2022-2026 https://biodiversitygenomics.eu
The Biodiversity Community Integrated Knowledge Library (BiCIKL) Project
The BiCIKL project (2021-2024 https://bicikl-project.eu
TETTRIs
TETTRIs (2022-2026 https://www.tettris.eu
Approach to the Coordination of the Project
During the 18 months the DiSSCo Transition Project will be strongly focused on consolidating and advancing results from previous work to ensure DiSSCo RI enters its implementation phase with high scientific, data, technical, organisational and financial readiness. The Project will not operate in isolation. As mentioned above, it will be linked to the wider ecosystem of related projects and the wider DiSSCo RI activities (implemented outside of the DiSSCo Transition Project). Our approach to Project coordination includes:
(i) Simple and effective internal project management in proportion to the grant's budget.
The project's management team will comprise the project coordinator, a project manager and a project administrator, who will work together within a Coordination Team. The WP leaders, the management team and the chair of the Technical Team will form a Project Executive Board. The Project Beneficiaries will form the Project Council, which will be the ultimate decision-making body of the Project. Details on the terms of reference and rules of procedure for all the above will be drafted and agreed upon in the Consortium Agreement.
(ii) Alignment between DiSSCo Transition Project governance and DiSSCo RI governance
The work plan of the Project must be aligned to the wider activities of the RI during these 18 months. The DiSSCo CSO will be connected to the Project. The Project Coordinator will be the DiSSCo Coordinator and executive director of the DiSSCo CSO.
(iii) Use of DiSSCo advisory bodies for consultation and assurance
We will make use of the existing and long-standing advisory bodies of DiSSCo RI for guiding the Project beneficiaries as follows:
One vision outlined in Horizon Europe (
The project’s Data Management Plan (DMP) will include policies on the publication, storage, persistence and accessibility of all data produced or handled by project partners and under the practices of open science. The project’s DMP should not be confused with the DiSSCo provisional DMP, which was created in EU funded project ICEDIG and will be updated and advanced into a machine-actionable DMP in WP3. The DiSSCo provisional DMP underpins active data management planning and stewardship with a focus on achieving maximum accessibility and reusability of data, the longevity of data and data preservation, community curation, linking to third-party information and reproducible science. This is ensured through protected characteristics described in the DiSSCo DMP, such as centrality, accuracy and authenticity of the Digital Specimen, protection of data, preservation of readability, traceability/provenance, and annotation history. These are essential for open science and open data and will also help build long‐term trust in DiSSCo.
Deliverable reports from this project will be stored in the DiSSCo Knowledgebase (https://know.dissco.eu), designed for persistent storage of FAIR documentation: all documents get a persistent identifier (DOI) and metadata that describes the document and its provenance when stored in this repository. Documents in the repository are publicly accessible and findable. Software created in the project will be provided with open-source licences in a public repository (GitHub). The e-services developed in the project will be provided as part of the European Open Science Cloud (EOSC) public offering.
The DiSSCo technical infrastructure supports open and collaborative research practices by enabling the sharing of data at the earliest possible stage and making this available for reuse, enrichment and validation by both humans (researchers, citizen scientists) and Artificial Intelligence-driven machines. The FAIR design ensures the inclusion of persistent identifiers and metadata to provide context. Project results will be shared with Creative Commons*
By sharing natural science collections data openly, DiSSCo will enable researchers to validate, extend, and build upon existing data leading to a more comprehensive understanding of nature and thus, contribute to further dissemination of the importance of biodiversity knowledge. In DiSSCo, we will also engage stakeholders such as policymakers, conservationists and the public by making data available in accessible formats, such as interactive maps, visualisations and online platforms. This will increase awareness and bring research evidence into policy and practice. In this context, understanding project-specific data management is also critical for ensuring the quality, integrity and accessibility of research data.
By implementing best practices in data management, we ensure that the Project will properly understand the data types and licences and will address access and ethical policies. Even though most project outputs are expected to be made openly accessible to the public, the specific terms of use, licensing, and ownership of the intellectual property may vary depending on agreements between the stakeholders and may need a process for transfer to the DiSSCo ERIC. During the Project, the Project Council (formed by all project beneficiaries) will further establish processes for the potential transfer of intellectual property ownership generated throughout the Project to the legal entity of DiSSCo ERIC. Finally, personal data will be handled under GDPR.
Establishing DiSSCo ERIC (Linked to Obj. 1 & 5)
Establishing the DiSSCo ERIC is the first step for DiSSCo to start operations. It will guarantee financial and organisational capacity to enter the project's construction phase successfully. Moreover, the legal entity will make it possible to establish long-term cooperation and strategic partnerships to create and implement DiSSCo RI programmes. Finally, the ERIC will provide the best platform to define, manage and plan actions to respond to continuous research and changes in national priorities.
The application process for DiSSCo ERIC requires the preparation of several technical documents that, together with national declarations on the international aspects of the ERIC, will form the corpus of information necessary to apply.
During the transition phase, the technical documentation (Statutes, Financial provisions and the Technical & Scientific description) will be completed to support negotiations among the Host and Founding members. Further work is foreseen for submitting the final versions as part of the formal application of Step 2.
The methodology will follow a comprehensive, well-structured process that ensures the participation of key stakeholders, the National Nodes and DiSSCo governing bodies through regular updates and consultations. It will do so by supporting the Funders Forum (FF) members in their role as potential founding members and collaborating closely with WP2 and WP5.
Furthermore, the work will include activities to facilitate discussions in the FF at national level. To do so, WP1 together with DiSSCo CSO, will carry out advocacy actions led by potential founding members to guarantee the necessary critical mass of countries joining DiSSCo ERIC in the first round.
DiSSCo ERIC will need implementing rules and regulations to allow operation and clear agreements between the ERIC and the distributed RI. The preparation of the rules will follow the methodology described above, supported by the experience gained in developing DiSSCo principles and governing requirements during the Preparatory Phase.
Completing the DiSSCo policy framework (Linked to Obj. 1)
It is planned to produce specific policy documents to support the development of the Statutes of the DiSSCo ERIC. The ERIC Regulation (EU) No 1261/201314*
Continue development of core technical infrastructure (Linked to Obj. 2)
Former DiSSCo-related EU-funded projects (Table
DiSSCo's value proposition entails several responses that require sustainable technical infrastructure. New services are required to realise the Digital Extended Specimen concept, merge all data classes resulting from the study of collection objects, facilitate community curation to better use limited taxonomic expertise, leverage artificial intelligence, track individual specimens across scientific outputs and to improve access to collections. However, these services can only be operational with a state-of-the-art and FAIR technical infrastructure. To get its place into the future of Research and Development, the infrastructure must also be fully AI-ready by enabling machine-actionable*
DiSSCo has started implementing this infrastructure through a FAIR-by-design architecture based on FDOs. The concept of FDO is a revolutionary way of organising data with the long-term aim of transforming the Internet into a meaningful and highly integrated data space. FDO provides fundamental contributions to the digital transformation in the “Turning FAIR into Reality” (
Several pilot projects have been conducted to test and develop the concept of FDO, but DiSSCo is the first RI that aims to implement FDOs at the core of its technical infrastructure. DiSSCo’s Preparatory phase has already started to implement this infrastructure since it will be fundamental for the further development of DiSSCo’s services, such as providing persistent identifiers (PIDs). PIDs are urgently needed to (re)-connect primary data, e.g. specimen records with molecular data and literature, and must continue to be globally developed at the international level of research in collaboration with DiSSCo’s partners worldwide (Suppl. material
Consensus building on standards and best practices (Linked to obj. 2 & 4)
DiSSCo's Preparatory phase reviewed existing community standards: Gaps have been identified that need to be addressed to develop the open Digital Specimen specification (openDS) - describing the data model, ontology and Application Programming Interfaces (APIs) for the DiSSCo data infrastructure and services. DiSSCo’s partners and the wider international biodiversity and geodiversity community started to address these identified gaps by developing new metadata standards, such as MIDS and Latimer Core, and adapting existing standards, such as Darwin Core and GGBN to DiSSCo RI needs for persistent references to data and related agents. This is needed to support, e.g. the proposed community curation model and to adapt to changing legal requirements. DiSSCo’s partners also led on international consensus-building for adopting these changes in data standards and infrastructures using them. DiSSCo developed best practices and guidelines such as the publication of digitisation guides (
Continued work is needed to further develop the core technical infrastructure. Best practices must be maintained and adapted to changing requirements. Also, coordination of pilot integrations and collaboration with international infrastructures, such as the Catalogue of Life (COL), GBIF, ENA and BOLD must be maintained. This coordination will continue to optimise the relevant infrastructures for bi-directional linking after the EU-funded BICIKL project finishes (April 2024), which is currently building the foundations for this cross-infrastructure interoperability. DiSSCo should keep abreast of these developing collaborations during its transition phase.
Besides coordinating these pilot integrations and collaboration with international infrastructures, DiSSCo will also continue to organise and support discussions with organisations through international platforms like International Partners for the Digital Extended Specimen (IPDES), an informal group of relevant stakeholders. It will ensure participation of DiSSCo in further developing the vision regarding a global roadmap for implementing the Digital Extended Specimen concept and a community-driven vision on collections’ data mobilisation.
Besides our ongoing international coordination and dissemination activities, further support is needed to facilitate the implementation and widespread adoption of DiSSCo APIs by researchers and infrastructure providers. This will be done during the Project by writing documentation, organising workshops with candidate implementers, and continuing discussions with collection management system (CMS) providers. It will also be important to continuously monitor the evolving needs of researchers during the transition phase of DiSSCo's data infrastructure and services to ensure that the DiSSCo Construction Master Plan remains up to date. This will require further discussion and testing of the scientific usability of the piloted DiSSCo infrastructure with researchers through workshops and consultation in the transition phase.
National Nodes engagement and inclusion (Linked to obj. 2)
As a distributed RI, DiSSCo aims to collate an extensive participation of institutions across Europe that will support the comprehensiveness of the data provided through DiSSCo related to bio- and geo-diversity collections and the wide use of the services built on top of that data. Accuracy, reliability and consistency of the data will entail the endorsement of the DiSSCo principles by a vast range of researchers, the implementation of consistent and interoperable procedures by the facilities involved and an overarching vision of how to run and sustain the RI shared at the European level. For that, the community is instrumental in supporting the RI's constituency, operation and sustainability. During the DiSSCo Preparatory Phase, the existing commitment towards constructing the DiSSCo RI started with the key and most relevant institutions gathered around CETAF that escalated to form National Nodes. Those Nodes include facilities of all sizes and all maturity levels holding collections in each participant country. The formation and consolidation of National Nodes have been crucial during DiSSCo Preparatory Phase and proved to be a very successful mechanism to channel common ambitions. DiSSCo has thus already been fundamental to initiate the development of collaborative processes, workflows, tools and services and to collate data of biodiversity collections at both institutional and national levels. Those National Nodes have been pivotal in constructing the national narrative to address the governmental funding agencies to support DiSSCo, by including digitisation of collections in scientific and strategic roadmaps run nationally, as well as formalising their interest to operate and, thus, promoting the need to fund DiSSCo ERIC.
European scientific facilities across Europe are very diverse in typology, size, funding, governance structures, and even in the development status of their digitisation efforts. Therefore, the National Nodes are also different in size, representation, commitment, and linkage to the funding of national agencies. Such diversity generates complexity that impedes having a unique narrative that may apply to all. For that, special efforts will be dedicated during the Project to supporting those National Nodes already interested in becoming active partners of the DiSSCo ERIC. Support will include engagement, networking, and developing a common message to transmit to their national representatives toconsolidate their participation in DiSSCo. During the Projects' lifetime, monthly online meetings and workshops will be held to ensure adequate feedback between the coordination and the community.
Thanks to the DiSSCo-linked projects, a set of instrumental tools have been developed to provide self-assessment mechanisms that help the institutions and the nodes to identify their status quo regarding the digitisation of their collections and, therefore, to address priorities and identify actionable recommendations. Those tools may apply to institutional or national levels and provide the basis to aggregate and organise the resulting information at a European scale. The DiSSCo Transition Project envisages a roadmap for using and exploiting these tools by the entire community around DiSSCo that will facilitate the inclusion and engagement of European collections’ holding institutions. Such a roadmap will also help to better structure the deployment, maintenance and enhancement of these tools, namely the Digitisation maturity tool, the Policies compliance tool, and the Specialisation plan. They will eventually be complemented by resources embedded into the DiSSCo helpdesk as a first entry point to allow an understanding of those tools and how to use them.
Finally, CETAF will act as a channel to ensure inclusion and encourage the participation of as many natural science collection holders as possible who will be actively committed to further developing the DiSSCo RI.
During the DiSSCo Preparatory Phase, we introduced a comprehensive framework for progress assessment using the concept of the Implementation Readiness Level (IRL). IRL is an evaluation framework that includes five dimensions and assesses the overall maturity of an RI towards its ability to embark on its implementation (construction) phase. Specifically, it measures the maturity of the RI regarding
The DiSSCo Transition Project will directly impact the IRL of the RI, aiming to start the early-phase implementation of the RI at its optimum IRL values (Fig.
The Project is expected to deliver impact across all five dimensions of the IRL, as described in Table
Expected Topic Outcomes(HORIZON-INFRA-2023-DEV-01-02) | Project impact in response to the Topic’s expectations |
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Enhanced ERA excellence and attractiveness through the availability of additional capacities |
The Project contributes to new ERA capacities through:
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Consistent and well-structured research infrastructures ecosystem in Europe |
Through the work in WP1 we are further maturing the already developed business (legal & financial) framework of DiSSCo and continue to engage with DiSSCo potential Funders. This will result in a much more appealing proposition for attracting national-level investments towards the development of the RI. Through WP2, endorsement and practical implementation by the research community will be addressed. It will contribute to creating a well-structured request for national prioritisation and integration in the pan-European ecosystem of RIs. Through the work in WP4 we will continue working with other European and international RIs to co-develop best practices and standards that ensure data interoperability and information exchange between the RI data platforms. |
Solid Member States/Associated Country engagement in pan-European research infrastructures, leading to their full implementation | |
Long-term perspective for investments in research infrastructures | |
Synergies and complementarities between new and existing research infrastructures, including technology infrastructures and infrastructures financed by ERDF |
Target 21 of the outcomes of the Conference of Parties of CBD (COP 15)*
The DiSSCo Transition Project is a necessary part of the development process of DiSSCo RI. It will directly impact the ability of the distributed community of museums to deliver their European RI. For the first time, DiSSCo will make it possible for natural history museums of Europe to virtually display their collections to the widest public, researchers and visitors, including the millions of natural objects stored in the museum’s repository that are usually not displayed to the public. The Project will also contribute to the solution space towards a more reliable, interoperable, and service-oriented biodiversity data domain. It will do so by:
In addition to the responses of the Project to the Topic’s expected outcomes above (Table
Impact through service development
Advancement of DiSSCo's core data infrastructure and e-services as planned in WP3 will directly impact knowledge development: it will provide open access to up-to-date and FAIR scientific data about collections and specimens and link these with derived and related biodiversity data. The data infrastructure and services will support the Green Deal and Biodiversity Strategy for 2030 by providing AI-assisted mass digitisation to scale up the publication of quality digital data. This will provide a further historical reference for climate change research and monitoring the degradation of global ecosystems.
The digital specimens provided by the DiSSCo data infrastructure will support the 'twin transition' vision: there is no Green Deal without digital (
The Unified Curation and Annotation Service (UCAS) improves the connection between citizens and science by enabling the co-creation and enhancement of scientific data about specimens to protect biodiversity. It will ensure optimal use of scarce taxonomic expertise in Europe by providing cross-institutional collaboration on curation and annotation, with the capability of connecting AI services to aid this further.
The Collections Digitisation Dashboard (CDD) can show levels of digitisation across all European collections using the community data standards described in WP4. Advancement of the CDD through integration with DiSSCo's data infrastructure will provide an up-to-date overview of the state of the collections in Europe, impacting decisions on prioritisation of collections digitisation, capacity building and funding.
Impact through stakeholders' engagement & enlargement
Engagement: WP2 will keep the research community engaged with DiSSCo development even if their respective countries have varying levels of commitment to DiSSCo ERIC. By tailoring narratives to the country level, our community will be able to address national priorities and communicate the value of DiSSCo to their governments and at a European level. Global challenges require interoperability, standardisation, common procedures and shared understandings of FAIRness of biodiversity-related information at a large scale that starts with the engagement of researchers and institutions as data providers.
The DiSSCo community's engagement also refers to the RI's inclusive approach to gather all types and categories of natural science collections holders. Smaller institutions cannot be left behind and, on the contrary, may need further support to align with overall European effort, fill in gaps and address specific needs to build an integrative infrastructure for excellent science operating in the ERA.
Finally, a community strongly engaged with DiSSCo's vision will allow the provision of bio and geodiversity data in the format and at the scale needed. This will constitute a reliable and accurate baseline supporting well-informed decision-making in tackling specific critical species and areas and implementing monitoring methods and systems that could halt biodiversity loss.
Enlargement: WP1, in collaboration with DiSSCo CSO, will work towards the enlargement of DiSSCo ERIC members. Discussions at the FF meetings will include significant information and specific narratives, a consistent information package useful for FF members to peer-to-peer advocates. The work will contribute to increasing awareness and support for one of the main priorities for the ERA and strengthen the overall European Research Infrastructures landscape.
The methodology set up by DiSSCo towards the preparation of the ERIC will also create the ideal environment for national funders and institutions to communicate and identify national priorities and common objectives, which will trigger the alignment of positions and coordination and guarantee the maximisation of resources and the fulfilment of common goals.
Standards: In 2018, the EU published a report estimating that not having FAIR research data costs the European economy at least €10.2bn annually (
Continuing the development of openDS and integrating and supporting emerging standards like Latimer Core and MIDS will ensure DiSSCo is interoperable with other RIs and improve natural science collections' discoverability and citability. These standards will allow RIs to understand the suitability of data for service provision, data enhancement (e.g., through AI-based services like those planned in WP3), or for research purposes. They also better support data-driven prioritisation of work by quantifying the outcomes and the level of digitisation achieved.
Best practices: WP4 will document best practices to support consistent, reliable, and transparent collection and management of biodiversity data, thus reducing errors and biases in the quality and accuracy of the data. International collaboration and agreement on best practices around data standards will help to promote the sharing and integration of biodiversity data across different regions and stakeholders, including researchers, policymakers and the public. By establishing common standards and best practices, data will be more easily shared for improved understanding of biodiversity patterns and trends, improving, in turn, the information provided to decision-makers, thus having a strong potential to result in better strategies to protect the diversity of life on Earth.
For outcomes that require wider DiSSCo community consensus (e.g. policies, best practices etc.), the Project’s approach will be based on a robust consultation process, which was successfully used during the Preparatory Phase of DiSSCo. The consultation process includes three distinct steps as follows (Fig.
To ensure maximum impact, DiSSCo Transition will design and implement a Dissemination, Exploitation and Communication strategy throughout the entire lifecycle of the project. Coordinated in WP5, the strategy will focus on achieving four main goals that build on towards the overall objectives of the DiSSCo Transition project:
The successful conclusion of the Preparatory Phase (2018-2023) has arguably established DiSSCo’s name in the European landscape of environmental RIs and paved the way for new organisational and technical development. This makes the DiSSCo Transition Phase the ideal time to disseminate and communicate on DiSSCo’s progress. DiSSCo’s dissemination and communication will require extending and refining narratives, and methods to both maximise the impact of the team’s interactions with the scientific community and society in general and feed the dialogue between DiSSCo and its different stakeholders.
Dissemination
Exploitation
Exploitation strategy will be part of the plan for Dissemination, Exploitation and Communication strategy developed by WP5. DiSSCo Transition’s exploitation strategy will include:
Communication
In full alignment with Horizon Europe’s recommendations and following the principles of DiSSCo’s Construction Master Plan underpinning a FAIR-by-design infrastructure, policies and services, DiSSCo Transition will embrace open science as its modus operandi. In DiSSCo’s view, this open and collaborative approach entails sharing data at the earliest possible stage, making this available for reuse, enrichment and validation while ensuring the implementation of persistent identifiers and metadata to give context and provenance information.
Data products (technical reports, plans, methodologies, etc.) will be stored in the DiSSCo Knowledge Base to be publicly accessible and findable. Similarly, software developments will be published in a public repository (GitHub) with open-source licences, while e-services will be provided as part of the EOSC public offering. All outputs will have their own persistent identifier (DOI) and metadata, ensuring an appropriate content description and provenance description. DiSSCo Transition’s Consortium Agreement, to be signed by all the project’s partners, will specify the terms for Intellectual Property Rights (IPR) management.
DiSSCo Transition Project has a lifetime of 18 months, a life span that is considered sufficient to critically address the combination of limited resources available with the need to bridge between the Preparatory and the Construction phases of DiSSCo. Work is concentrated in 1.5 years to ensure efficiency in resource use while allowing the implementation of expected actions in a focused program. The previous DiSSCo programme provided the basis to ensure continuation of activities in a both seamless and targeted manner, with the right partners fully committed, the synergies and interlinkages between WPs already tested, and a set of objectives clearly defined.
The work packages are summarised in Table
Work Package | Work Package Title | Lead Participant Short Name | Person-months | Start Month | End Month |
---|---|---|---|---|---|
WP1 | ERIC Roadmap & Policy Framework | Naturalis | 35 | M01 | M18 |
WP2 | National Nodes Engagement & Inclusion | CETAF | 34 | M01 | M18 |
WP3 | Data Infrastructure & Core Services | SGN | 62 | M01 | M18 |
WP4 | International Collaboration on (data) Standards | NHM | 18 | M01 | M18 |
WP5 | Management, Communication & Outreach | Naturalis | 12 | M01 | M18 |
Objectives:
Description of work
Work package 1 (WP1) builds on the work done during DiSSCo’s Preparatory Phase, specifically on the recommendations on organisation and finance from the DiSSCo Construction Master Plan. The goal is to guarantee the successful constitution of the legal entity and to ensure a critical number of member countries supporting the DiSSCo ERIC to allow operations. Furthermore, the work aims to provide organisational and financial structures to support daily governance.
WP1 benefits from the experience of the participant partners already involved during the Preparatory Phase. The methodology will follow the principles of transparency and inclusiveness with a well-structured process from drafting to decision and the participation of the main DiSSCo stakeholders. WP1 will collaborate with WP2 and WP3 to guarantee a successful implementation and the overall increase of the IRL.
Task 1.1: ERIC Roadmap implementation (M1-M18) - Naturalis, RBINS, X-Officio, MNHN, BGMeise, CETAF.
This task focuses on the ERIC application process: supporting the preparation of technical documentation, supporting the Funders Forum (FF) and potential founding members, and preparing narratives that highlight the added value of the Research Infrastructure (RI).
The work will be done in close collaboration with the FF, the advisory body in which national funding agencies are represented, to ensure complete alignment between DiSSCo developments and national priorities. Furthermore, to support the enlargement of founding members, the team will work in the preparation of a Socio-Economic impact assessment that will showcase the added value of the RI and will support advocacy activities.
Task 1.2: ERIC Implementing Rules and Terms of Reference for the DiSSCo ERIC bodies (M1-M18) - X-Officio, RBINS, Naturalis, MNHN, BGMeise.
This task will focus on the preparation of the documents which are required for the proper functioning of the DiSSCo ERIC, other than the Statutes (the Statutes are covered in Task 1.1). As provided for by the ERIC Regulations, the Statutes are complemented by a set of Implementing Rules complying with the Statutes as well as a set of policies and principles which will be referred to in the body of the Statutes (covered mainly in Task 1.3 and partially under this Task).
Task 1.3: Policy Framework (M1-M18) - RBINS, X-Officio, MNHN.
This task focuses on the preparation of the policy documents which will be referred to in the Statutes of DiSSCo ERIC, in particular, on the preparation of Access and Data policies in close collaboration with WP3 and Employment and principles for Intellectual Property Rights (IPR) policies.
Objectives:
Description of work
The tasks under WP2 are intended to achieve consolidation of certain dimensions (information, engagement and exploitation) related to the community, which will ensure the necessary increase of the IRL in the organisational dimension. Collaboration with CETAF will multiply the impact.
Task 2.1: Consolidate channels of participation of NNs in the development of DiSSCo (M1-16) - CETAF, Naturalis, SGN, RBINS, NHM, NHM UoC, NHM ULisboa, IBER-BAS, PSB-SAS, UTartu, BGMeise, NHMD, UniFi, MNHN, FUB-BGBM.
It is crucial to keep the community updated on the DiSSCo process. Similarly, to continue building the RI with a bottom-up perspective, it is essential to receive feedback whenever needed to support the development of the core services and critical dimensions included in the project. For this purpose, monthly recurring meetings will be organised with all the participating National Nodes. Three (3) workshops are envisaged (to be held in collaboration with corresponding related WPs) in order to 1) keep the nodes informed on the progress of the core activities included in the transition process to achieve shared understanding, 2) facilitate sustainability of the engagement through stable connection with CETAF, and 3) receive feedback on the further development of the RI to meet the needs and requirements detected at a national/institutional perspective.
The main aspects to debate will be the following to understand, facilitate and ensure endorsement of DiSSCo outcomes across the community:
These workshops are meant for fostering engagement of the beneficiaries towards the DiSSCo ERIC but also to facilitate an inclusive approach on critical aspects of the core development of the DiSSCo RI. Two of them (the first and second) will be held virtually, whilst the third will run on a hybrid format, under the organisation of NHM. The latter will be organised jointly with WP4 and the objectives of both WPs will be merged in a single event. The outcomes of that joint workshop will serve both WPs, 2 and 4, by collating information from experts, on a technical basis, and from institutions and NNs, in terms of implementation. The discussions during these events will provide fundamental information with a bottom-up approach that will serve, among others, to consolidate the framework of standards applicable, to contribute to the inclusive development of the DiSSCo community and to tackle critical aspects of core architecture such as identification of bottlenecks, sustainability or implementation requirements. Outcomes from Workshops will support the identification of best practices and recommendations to enhance the participatory schema for DiSSCo RI.
Task 2.2: Identify means to sustainably collect, aggregate and analyse information from National Nodes (M1-M18) - RBINS, CETAF, NHM, Naturalis, MNHN.
The contribution of the beneficiaries with data is essential to rely on well-grounded tools that could support the participation of researchers, institutions and nodes in the DiSSCo Research Infrastructure. To that end, it is important to enlarge the ground base of the data collected during previous DiSSCo-linked projects to be able to
This Task will be dedicated to identifying sustainable pathways to gather contributions from the community and, therefore, enhance means to examine priorities, promote the creation of centres of excellence and set the basis for strategic partnerships, around the basic tools that were initiated during the DiSSCo Preparatory Phase, specifically:
For that, relevant data shall be collated to support and secure the usability of those mechanisms with the addition of more content and an examination of analytical data pipelines, and procedures.
Task 2.3: Provide entry-point resources for the DiSSCo Helpdesk (M4-16) - CETAF, ULisboa, UoC.
To ensure inclusion and effective participation, the community needs to be capable of exploiting DiSSCo RI and, for that, it needs to be tooled-up and provided with tailored training resources to foster the participation of instrumental groups. This Task aims to create a manual/set of guidelines that will be integrated into the first layer of the DiSSCo Helpdesk, to facilitate understanding, access and exploitation of DiSSCo RI from the users’ perspective. Such resource for community capacity building will be based on the lessons learned from the related project BiCIKL-Biodiversity Community Integrated Knowledge Library and drawing from the recommendations contained in the Construction Master Plan resulting from DiSSCo Prepare project. Interconnection of the envisaged DiSSCo Helpdesk with the DiSSCo Knowledge Base as well as with other European Environmental Research Infrastructures and the European Open Science Cloud-EOSC will also be addressed in this Task. Integration of AI into the Helpdesk mechanism will be explored. The Helpdesk will constitute a vital component for attracting external users and stakeholders and increasing their satisfaction with DiSSCo, ultimately strengthening DiSSCo sustainability.
Objectives:
Description of work
This work package aims to advance DiSSCo's data infrastructure based on its Digital Specimen architecture (DSarch) and core end-user services (e-services) that will rely on this infrastructure for reading, writing, processing and annotating data. These services are the European Loans and Visits System (ELViS), the Unified Curation and Annotation System (UCAS), the Collections Digitisation Dashboard (CDD), and the Specimen Data Refinery services (SDR). The work package also aims to prepare for operation under the ERIC by advancing the provisional DiSSCo Data Management Plan, including supporting documentation in preparation for the distributed operation and continued development of the data infrastructure and end-user services. These activities will strengthen DiSSCo’s IRL with reference to technological readiness.
Task 3.1: Further develop the piloted Digital Specimen Architecture (DSarch) into a minimum valuable product (M1-M18) - Naturalis, SGN.This task will plan and develop piloted components of DSarch into a minimum valuable product (MVP) of Technical Readiness Level (TRL) 6: Technology demonstrated in a relevant environment with a representative set of real data, with enough features to attract early-adopter users of the RI. DSarch has been developed by the DiSSCo development team (funded by DiSSCo members) based on the results from the DiSSCo-linked projects such as the first version of the openDS (open Digital Specimen) specification with a conceptual data model and API specifications, the data modelling framework, drafts of the developed MIDS and Latimer Core standards and the provisional DiSSCo DMP.
The architecture design and development of the PID infrastructure, one of the DSarch components, is carried out under the EU-funded BiCIKL project and currently TRL 4-5 (proof of concept tested with Handle infrastructure). Other components of DSarch are the Digital Specimen Repository, Data Processing and Publishing services, Indexing services and API, and AAI. These are already demonstrable in a controlled environment prior to this project (TRL 4-5). During further development, DSarch will be aligned with evolving standards and specifications (e.g. openDS +FAIR Digital Objects/FDO) in connection with ongoing tasks in WP4. DSarch will also be extended to support future event-based data updates: events in institutional data management systems or end-user services that trigger updates in the DiSSCo data infrastructure and vice versa.
The DiSSCo infrastructure is summarised in Fig.
Task 3.2: Advancement of end-user Services through integration with core infrastructure and continued e-services development (M1-M17) - SGN, MNHN, NHM, CETAF, RBINS, Naturalis.
This task will focus on integration of SDR, CDD, ELViS and UCAS end-user services with the API and AAI components of the core infrastructure, and Machine Learning-assisted services for data enrichment (such as SDR) with the Data Processing and Publishing component. The task will also expand the functionality of ELViS with a service for individual visits. By implementing the FAIR Digital Object Architecture, the e-services involved will be conceptually and technically merged to form a highly integrated service ecosystem, and access will be provided through a common AAI. This AAI infrastructure is EOSC compliant and provides federated authentication and authorisation among participating organisations to provide cross-institutional services. The work includes the migration of ELViS users and the change of the party responsible for providing the system, which will be carried out in line with GDPR. Special attention will be given to developing the end-user services to provide and connect with open and standardised APIs for future expansion and interaction with other RIs (following the API guidelines developed in the BiCIKL project). This will enable DiSSCo to connect with data infrastructures from environmental RIs such as eLTER and LifeWatch ERIC as well as with services from international data aggregators like GBIF.
Task 3.3: Update and advance the DiSSCo DMP for machine actionability and create supporting documentation (M1-16) - UTartu, Naturalis, SGN.
This task will update and continue the work towards a DiSSCo DMP for the ERIC as initiated in the ICEDIG project (
The DMP will be supported with service management documentation for preparing the transition and further development of the DiSSCo data infrastructure and e-services ecosystem for operation under the ERIC. This documentation will focus on service enrolment with the AAI services (describing access rights management and user profiles), usage of PID services (with a small case study for applying PIDs to specimen objects), documentation for future collaboration in teams on distributed code development, and on documentation for connecting small datasets (i.e. with tools like OpenRefine).
Objectives:
Description of work
The biodiversity data community has made good progress in developing new information standards during the SYNTHESYS+, ICEDIG and DiSSCo Prepare projects (
WP4 will continue to support and enable this work, ensuring that the different standards reach the level of maturity required for DiSSCo and that the communities remain engaged. We will support the testing and documentation of existing tools that aim to implement standards and bridge gaps between those who create data and the needs of those that use the data (e.g.,
Task 4.1 Standards interoperability (M1-18) - NHM, Naturalis, SGN, UTartu, BGMeise.
Task 4.1 will facilitate the continued development of contemporary community standards (e.g., Minimum Information about a Digital Specimen (MIDS), and Latimer Core) to ensure alignment with openDS, and support the testing of current and emerging tools that increase standards interoperability. This task will coordinate pilot integrations and collaboration with international infrastructures, e.g., Catalogue of Life (CoL), GBIF including ChecklistBank, and the Barcode of Life Data System (BOLD), and continue discussions with standards development groups like Biodiversity Information Standards (TDWG). It will advance the development of the openDS specification, extend the data model, and continue to harmonise with existing and emerging standards.
Task 4.2 Standards adoption and use (M1-18) - NHM, Naturalis, CETAF, SGN, UTartu. Task 4.2 will organise and support discussions with international organisations through e.g. IPDES (International Partners for the Digital Extended Specimen – informal group) for DES using Persistent Identifiers (PIDs). This task will promote the implementation of prototype DiSSCo APIs and community standards by writing documentation, providing examples, organising workshops with implementers, and continuing discussions with Collections Management System providers on effective standards adoption.
Task 4.2 will coordinate discussion with users and key stakeholders on scientific use cases and FAIR practices through workshops and community consultation, including National Nodes (T2.1) and DiSSCo’s Scientific Advisory Board. This will be done with the planning and iterative implementation of the Minimum Viable Product in Task 3.1. Finally, it will continue the development of a community vision on how to integrate geo-collections data within the DiSSCo core data infrastructure in collaboration with the CETAF Earth Science group.
Objectives:
Description of work
WP5 includes Tasks that focus on the coordination, support and communication actions of the Project. It is organised into three Tasks as follows:
Task 5.1 Day-to-Day Management (M1-M18) - Naturalis.
This task focuses on the day-to-day management of the project. Specifically:
This Task will be under the responsibility of a Project manager and Project administrator. Together with the Project Coordinator will form the Project coordination Team. The Project will use, already established in DiSSCo, Project management and communication tools. This will lower the access threshold of these tools for the beneficiaries, who are already familiar with their use. Furthermore, we will benefit from the already established administrative structure of DiSSCo RI to reduce costs linked to the management of the Project.
A kick-off meeting is planned for Month 1. A final event of the Project will run at the end of the project and if feasible, be coupled with the official start of the DiSSCo ERIC. The event will showcase the results of the Project and hand over its outputs to the DiSSCo ERIC management. A Data Management Plan for the Project will be delivered by Month 3.
Task 5.2 Support to governance bodies of DiSSCo RI (M1-M18) - Naturalis, CETAF.
The main objective of this task is to support the operation and communication of the Project's key governance and management structures and the DiSSCo RI as well. Specifically, this task will focus on:
The responsibility of this task lies mainly with the Executive Board of the project. A sound governance of the project will be guaranteed in the provisions of the Consortium Agreement.
Task 5.3 Coordination of dissemination, exploitation and communication activities (M1-M18) - Naturalis, CETAF, NHM, SGN.
This Task will focus on the coordination of the communication, exploitation and dissemination activities of the Project, as described in section 2.2 of the Proposal. A Dissemination and Exploitation plan including communication activities will be delivered early in the Project’s life. Participation in third-party events will also be coordinated through Task 5.3.
The project's Deliverables, Milestones and Staff Effort are summarised in Table
Deliverable (number) | Deliverable name | Work package number | Short name of lead participant | Type | Dissemination level | Delivery date (month) |
---|---|---|---|---|---|---|
D1.1 | Corpus of documentation for ERIC application (Task 1.1) | WP1 | Naturalis | Report (R) | Confidential (CO) | M18 |
D1.2 | Corpus of implementation rules and further regulation for DiSSCo ERIC (Task 1.2) | WP1 | X-Officio | Report (R) | Confidential (CO) | M18 |
D1.3 | Corpus of main policies for DiSSCo ERIC (Task 1.3) | WP1 | RBINS | Report (R) | Confidential (CO) | M18 |
D2.1 | Participatory schema for DiSSCo NNs (Task 2.1) | WP2 | CETAF | Report (R) | Public (PU) | M16 |
D2.2 | Integration and adoption roadmap of assessment tools (Task 2.2) | WP2 | RBINS | Report (R) | Public (PU) | M18 |
D2.3 | Model of training resources for users in connection with the DiSSCo Helpdesk (Task 2.3) | WP2 | CETAF | Report (R) | Public (PU) | M16 |
D3.1 | Minimum Viable Product of CoreInfrastructure with a selected set of relevant data (TRL 6) (Task 3.1) | WP3 | Naturalis | Other | Public (PU) | M18 |
D3.2 | ELViS running in an operationalenvironment managed by MNHN, its users migrated and connected to the AAI core infrastructure component and connected with a new service forsupporting individual visits (Task 3.2) | WP3 | MNHN | Other | Public (PU) | M17 |
D3.3 | DiSSCo DMP ready for use in the ERICwith supporting documentation anddemonstrator for a machine-actionableDMP enabling provenance trackingbased on open standards (PROV-O)(Task 3.3) | WP3 | UTartu | Other | Public (PU) | M16 |
D4.1 | Report on state of standards interoperability and gap analysis for next stage of DiSSCo RI development. (M18) (Task 4.1) | WP4 | NHM | Report (R) | Public (PU) | M18 |
D4.2 |
Report on standards adoption including workshops, current state of geo-collections data mobilisation and documentation for DiSSCo services(Task 4.2) |
WP4 | NHM | Report (R) | Public (PU) | M18 |
D5.1 | Data Management Plan (Task 5.1) | WP5 | Naturalis | Report (R) | Public (PU) | M3 |
D5.2 | Project Wrap-up Event (Task 5.3) | WP5 | Naturalis | DEC | Public (PU) | M18 |
Milestone number | Milestone name | Related work package | Due date (month) | Means of verification |
---|---|---|---|---|
MS1.1 | Socio-Economic impact assessment (Task 1.1) | WP1 | M18 | Document |
MS1.2 | Rules of Procedure for the DiSSCo ERIC General Assembly (Task 1.2) | WP1 | M10 | Document |
MS1.3 | Rules of Procedure for the Nodes Advisory Committee (Task 1.2) | WP1 | M10 | Document |
MS1.4 | Terms of reference for the DiSSCo Executive Board & the Scientific, Ethical and Technical Advisory Body (Task 1.2) | WP1 | M10 | Document |
MS1.5 | Principles for financial rules & Procurement framework for DiSSCo (Task 1.2) | WP1 | M15 | Document |
MS1.6 | Data policy (Task 1.3) | WP1 | M13 | Document |
MS1.7 | Access policy (Task 1.3) | WP1 | M17 | Document |
MS1.8 | Employment policy (Task 1.3) | WP1 | M17 | Document |
MS1.9 | IPR Policy framework (Task 1.3) | WP1 | M17 | Document |
MS2.1 | (Virtual) Workshop on technical core architecture (Task 2.1 in connection to T3.1) | WP2 | M8 | Workshop |
MS2.2 | (Virtual) Workshop on legal status-quo (Task 2.1 in connection to T1.2) | WP2 | M10 | Workshop |
MS2.3 | Survey for tools data collection (Task 2.2) | WP2 | M6 | Document |
MS2.4 | Translation of lessons learned from BICIKL into the DiSSCo context (Task 2.3) | WP2 | M7 | Document |
MS3.1 | Definition of a TRL 6 Minimum Viable Product of core infrastructure (Task 3.1) | WP3 | M6 | Document |
MS3.2 | Plan for integration of the Collection Digitisation Dashboard with the core infrastructure and connection with Latimer Core compatible data sources for collection descriptions (Task 3.2) | WP3 | M4 | Document |
MS3.3 | Pilot integration of Machine Learning-assisted services for dataenrichment (such as SDR) with DSarch to create a coherent framework enabling seamless integration of machine-annotated data with the Digital Specimens (Task 3.2) | WP3 | M12 | Demonstrator |
MS3.4 | Documentation for the enrolment of DiSSCo services into DiSSCo’s federated AAI infrastructure services and specify authorization schemas for resources in the infrastructure (Task3.3) | WP3 | M14 | Document |
MS4.1 | Interim report on state of standards interoperability (Task 4.1) | WP4 | M9 | Document |
MS4.2 |
First user and technical stakeholder workshops (Virtual + In-person) on standards in support of the development in WP3 (Task 4.2) |
WP4 | M12 | Workshop |
MS4.3 |
Second user and technical stakeholder workshops (Virtual + In- person) to discuss the progress with standards interoperability in the development in WP3 (Task 4.2) |
WP4 | M15 | Workshop |
MS5.1 | Project kick-off meeting (Task 5.1) | WP5 | M1 | Meeting |
MS5.2 | Plan for Dissemination, Exploitation including Communication activities (Task 5.3) | WP5 | M6 | Document |
Participant Number / Short Name | WP1 | WP2 | WP3 | WP4 | WP5 | Total Person-Months per Participant |
---|---|---|---|---|---|---|
1. Naturalis | 5.0 | 1.0 | 15.0 | 2.0 | 9.0 | 32.0 |
2. CETAF | 2.0 | 9.0 | 1.0 | 1.0 | 2.0 | 15.0 |
3. SGN | 1.0 | 14.0 | 2.0 | 0.5 | 17.5 | |
4. NHM | 2.0 | 9.0 | 7.5 | 0.5 | 19.0 | |
5. UoC | 2.0 | 2.0 | ||||
6. ULisboa | 2.0 | 2.0 | ||||
7. IBER-BAS | 2.0 | 2.0 | ||||
8. PSB-SAS | 2.0 | 2.0 | ||||
9. UTartu | 1.0 | 6.0 | 3.5 | 10.5 | ||
10. BGMeise | 4.0 | 1.0 | 2.0 | 7.0 | ||
11. X-Officio | 12.0 | 12.0 | ||||
12. RBINS | 8.0 | 3.0 | 1.0 | 12.0 | ||
13. NHMD | 2.0 | 2.0 | ||||
14. UniFi | 2.0 | 2.0 | ||||
15. MNHN | 4.0 | 2.0 | 16.0 | 22.0 | ||
16. Freie Universität Berlin | 2.0 | 2.0 | ||||
Total Person Months | 35.0 | 34.0 | 62.0 | 18.0 | 12.0 | 161.0 |
The DiSSCo Transition Project consortium directly stems from the DiSSCo wider partnership. The Consortium involves 16 Partners with three profiles (i) DiSSCo partners that bring in required technical expertise for the implementation of the work plan, (ii) external to DiSSCo expert partners and (iii) DiSSCo institutions that represent national nodes.
To ensure the continuity of work from the Preparatory Phase to the Transition Phase, many of the members of the consortium of the DiSSCo Prepare Project are also leading parts of the work in the DiSSCo Transition Project. This ensures the productive advancement of the work and good collaboration between all the Project’s partners, as they have been working together already since 2018. Similarly, the long-standing collaboration among partners facilitates the concentration of work in the short time frame of 18 months without risking the thoroughness and the quality and timely delivery of expected outcomes. Given the complexity of the work, especially in legal documentation (WP1) the consortium also brings in an external legal expert partner (X-Officio). This partner has specific legal expertise in European RIs and has already provided legal services to DiSSCo over the last four years.
The partnership includes the following institutions with specific responsibilities in the work plan of the Project:
Naturalis Biodiversity Center (Naturalis) has been leading the development of DiSSCo, hosts the DiSSCo Coordination and Support Office and takes up the role of the Coordinator of the Project, to ensure alignment between the DiSSCo RI leadership and the Project coordination. Furthermore, Naturalis has been championing the technical development of the core data services of DiSSCo and co-developing its underlying data architecture. With a strong profile in research infrastructures and a 70-strong Sector for Digital, Naturalis is committed to the success of DiSSCo and has put in significant in-kind investments for its development.
Consortium of European Taxonomic Facilities (CETAF), representing the European community of taxonomic facilities, is a core partner in the process of establishing the DiSSCo RI, has taken a prominent role in all the DiSSCo-related projects and leads the Coordination and Support Office alongside Naturalis. Due to its unique role as a network, CETAF has been instrumental in fostering communication and collaboration among DiSSCo stakeholders and in paving the way for support services towards the future RI across several projects (ICEDIG, SYNTHESYS+, DiSSCo Prepare).
The Natural History Museum, London (NHM) has led the SYNTHESYS series of projects since 2004, establishing the concept and delivery of both Physical and Virtual Access in Natural Science Collections. In recent DiSSCo-linked projects (ICEDIG, SYNTHESYS+, DiSSCo Prepare), NHM has led on key technical components of the future DiSSCo RI like the Specimen Data Refinery and measuring the financial benefits of digitisation. NHM has been coordinating the development of the DiSSCo-UK node and brings experienced managerial and technical specialists from its Digital, Data and Informatics group.
Senckenberg Gesellschaft für Naturforschung (SGN) was responsible for the work package “technical architecture & service provision” in DiSSCo Prepare and is actively involved in the development of the DiSSCo-linked specifications openDS and MIDS. SGN represents DiSSCo (together with Naturalis) in the context of the FAIR Digital Objects Forum, which develops the concepts essential for the implementation of the Digital Specimen as an FDO. Furthermore, SGN is actively advancing Germany’s participation in the transformation process to the ERIC in close cooperation with its national partners (DiSSCo-D).
Further to the Partners above (WP leaders) the Consortium includes partners with specific expertise (technical ororganisational) across the Tasks. Specifically, Muséum national d'Histoire naturelle (MNHN) brings in expertise in the development of ELViS system (WP3), as well as expertise in the financial and organisational development of DiSSCo. Similarly, Institut Royal Des Sciences Naturelles De Belgique (RBINS) has previously led the development of the organisational framework of DiSSCo and will continue within DiSSCo Transition Project. Tartu Ülikool (UTartu) and Agentschap Plantentuin Meise (BGMeise) bring in long-standing expertise in standardisation and technical developments, as well as expertise in procurement frameworks. The Partners of WP2 (Task 2.1) also lead the national activities regarding the engagement of the national funders to DiSSCo across all countries that are members of the DiSSCo FF.
We would like to thank the following people who contributed to discussions and planning during the grant writing process: Louise Isager Ahl, Maria Judite Alves, Thomas Borsch, Henrik Enghoff, Rui Figueira, Eva Häffner, Josh Humphries, Boyko Georgiev, Ohad Graber-Soudry, Marko Lovric, Patrick Semal, Vincent Smith, Matt Woodburn.
Proposal Title: Distributed System of Scientific Collections Transition to ERIC Project. Grant agreement ID: 101130121
Acronym: DiSSCo Transition
Stichting Naturalis Biodiversity Center (Naturalis) Netherlands
Original proposal authors:
PDF of Letter of Intent for Collaboration, currently live as of 2023-11-06 on https://www.cognitoforms.com/DiSSCo1/LetterOfIntentForCollaboration
DiSSCo Prepare DPP Work Package 5 - Common Resources and Standards (MS5.1–5.7 and D5.1) and Work Package 6 - Technical Architecture & Services provision (D6.1–D6.4).
"A project management approach that involves breaking the project into phases and emphasizes continuous collaboration and improvement. Teams follow a cycle of planning, executing, and evaluating." -
"Under a DevOps model, development and operations teams are no longer “siloed.” Sometimes, these two teams are merged into a single team where the engineers work across the entire application lifecycle, from development and test to deployment to operations, and develop a range of skills not limited to a single function." -
"Darwin Core is a standard maintained by the Darwin Core Maintenance Interest Group [...] Darwin Core is primarily based on taxa, their occurrence in nature as documented by observations, specimens, samples, and related information."
"The Access to Biological Collections Data (ABCD) Schema is an evolving comprehensive standard for the access to and exchange of data about specimens and observations (a.k.a. primary biodiversity data)." -
"IIIF is a set of open standards for delivering high-quality, attributed digital objects online at scale. It’s also an international community developing and implementing the IIIF APIs. IIIF is backed by a consortium of leading cultural institutions." -
Minimum Information about a Digital Specimen - current draft of specification on GitHub.
"The Latimer Core (LtC) schema, named after Marjorie Courtenay-Latimer, is a standard designed to support the representation and discovery of natural science collections by structuring data about the groups of objects that those collections and their subcomponents encompass." -
“Open Science represents a new approach to the scientific process based on cooperative work and new ways of diffusing knowledge by using digital technologies and new collaborative tools. The idea captures a systemic change to the way science and research have been carried out for the last fifty years: shifting from the standard practices of publishing research results in scientific publications towards sharing and using all available knowledge at an earlier stage in the research process” -
"Open data is data that can be freely used, re-used and redistributed by anyone - subject only, at most, to the requirement to attribute and sharealike." -
"Creative Commons (CC) is an international nonprofit organization dedicated to helping build and sustain a thriving commons of shared knowledge and culture." - https://creativecommons.org/
FDO Machine Actionability Definition V2.2, https://drive.google.com/file/d/1Bbzb2f8yuR01E0uGldctE9JXF8DuTw8g/view
Council Regulation (EU) No 1261/2013 of 2 December 2013 amending Regulation (EC) No 723/2009 concerning the Community legal framework for a European Research Infrastructures Consortium (ERIC) - Permanent URL: https://eur-lex.europa.eu/eli/reg/2013/1261/oj
COP15 Target 21 “Ensure that the best available data, information and knowledge, are accessible to decision makers, practitioners and thepublic to guide effective and equitable governance, integrated and participatory management of biodiversity, and to strengthen communication, awareness-raising, education, monitoring, research and knowledge management and, also in this context, traditional knowledge, innovations,practices and technologies of indigenous peoples and local communities should only be accessed with their free, prior and informed consent, inaccordance with national legislation.”
The Destination Earth (DestinE) is a flagship initiative of the European Commission to develop a highly accurate digital model of the Earth on a global scale. - https://digital-strategy.ec.europa.eu/en/policies/destination-earth