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  <front>
    <journal-meta>
      <journal-id journal-id-type="publisher-id">17</journal-id>
      <journal-id journal-id-type="index">urn:lsid:arphahub.com:pub:8E638694-B4E0-570A-856A-746FF325BF6B</journal-id>
      <journal-id journal-id-type="aggregator">urn:lsid:zoobank.org:pub:FEF66878-15EE-4F8B-B369-7652D735020E</journal-id>
      <journal-title-group>
        <journal-title xml:lang="en">Research Ideas and Outcomes</journal-title>
        <abbrev-journal-title xml:lang="en">RIO</abbrev-journal-title>
      </journal-title-group>
      <issn pub-type="epub">2367-7163</issn>
      <publisher>
        <publisher-name>Pensoft Publishers</publisher-name>
      </publisher>
    </journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.3897/rio.11.e171663</article-id>
      <article-id pub-id-type="publisher-id">171663</article-id>
      <article-id pub-id-type="manuscript">29010</article-id>
      <article-categories>
        <subj-group subj-group-type="heading">
          <subject>Methods</subject>
        </subj-group>
        <subj-group subj-group-type="scientific_subject">
          <subject>Aquaculture &amp; Fisheries</subject>
          <subject>Environmental economics &amp; policies</subject>
          <subject>Environmental impact assessment </subject>
          <subject>Environmental protection</subject>
        </subj-group>
        <subj-group subj-group-type="sdg">
          <subject>14.c Conservation &amp; sustainable use of ocean resources</subject>
          <subject>Life below water</subject>
        </subj-group>
      </article-categories>
      <title-group>
        <article-title>Mitigation measures, fishing practices and technologies to reduce interactions between Endangered, Threatened, and Protected (ETP) species and drifting longline fisheries (LLD) targeting large pelagics: a global scoping review protocol</article-title>
      </title-group>
      <contrib-group content-type="authors">
        <contrib contrib-type="author" corresp="yes">
          <name name-style="western">
            <surname>Anastasopoulou</surname>
            <given-names>Iro</given-names>
          </name>
          <email xlink:type="simple">iroanastasopoulou9@gmail.com</email>
          <xref ref-type="aff" rid="A1">1</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Kavakakis</surname>
            <given-names>Konstantinos</given-names>
          </name>
          <xref ref-type="aff" rid="A1">1</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Asimogiorgou</surname>
            <given-names>Vasiliki</given-names>
          </name>
          <xref ref-type="aff" rid="A1">1</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Iatrou</surname>
            <given-names>Foteini</given-names>
          </name>
          <uri content-type="orcid">https://orcid.org/0009-0008-6272-5564</uri>
          <xref ref-type="aff" rid="A1">1</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Petza</surname>
            <given-names>Dimitra</given-names>
          </name>
          <xref ref-type="aff" rid="A2">2</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Carbonara</surname>
            <given-names>Pierluigi</given-names>
          </name>
          <xref ref-type="aff" rid="A3">3</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Tserpes</surname>
            <given-names>George</given-names>
          </name>
          <xref ref-type="aff" rid="A4">4</xref>
        </contrib>
        <contrib contrib-type="author" corresp="no">
          <name name-style="western">
            <surname>Alemany</surname>
            <given-names>Francisco</given-names>
          </name>
          <xref ref-type="aff" rid="A5">5</xref>
        </contrib>
        <contrib contrib-type="author" corresp="yes">
          <name name-style="western">
            <surname>Kalogirou</surname>
            <given-names>Stefanos</given-names>
          </name>
          <email xlink:type="simple">stefanos.kalogirou@aua.gr</email>
          <uri content-type="orcid">https://orcid.org/0000-0002-3064-9236</uri>
          <xref ref-type="aff" rid="A1">1</xref>
        </contrib>
      </contrib-group>
      <aff id="A1">
        <label>1</label>
        <addr-line content-type="verbatim">Agricultural University of Athens, Athens, Greece</addr-line>
        <institution>Agricultural University of Athens</institution>
        <addr-line content-type="city">Athens</addr-line>
        <country>Greece</country>
      </aff>
      <aff id="A2">
        <label>2</label>
        <addr-line content-type="verbatim">University of the Aegean, Mytilene, Greece</addr-line>
        <institution>University of the Aegean</institution>
        <addr-line content-type="city">Mytilene</addr-line>
        <country>Greece</country>
      </aff>
      <aff id="A3">
        <label>3</label>
        <addr-line content-type="verbatim">Fondazione COISPA ETS, Bari, Italy</addr-line>
        <institution>Fondazione COISPA ETS</institution>
        <addr-line content-type="city">Bari</addr-line>
        <country>Italy</country>
      </aff>
      <aff id="A4">
        <label>4</label>
        <addr-line content-type="verbatim">Hellenic Centre for Marine Research, Heraklion, Greece</addr-line>
        <institution>Hellenic Centre for Marine Research</institution>
        <addr-line content-type="city">Heraklion</addr-line>
        <country>Greece</country>
      </aff>
      <aff id="A5">
        <label>5</label>
        <addr-line content-type="verbatim">International Commission for the Conservation of Atlantic Tunas, Madrid, Spain</addr-line>
        <institution>International Commission for the Conservation of Atlantic Tunas</institution>
        <addr-line content-type="city">Madrid</addr-line>
        <country>Spain</country>
      </aff>
      <author-notes>
        <fn fn-type="corresp">
          <p>Corresponding authors: Iro Anastasopoulou (<email xlink:type="simple">iroanastasopoulou9@gmail.com</email>), Stefanos Kalogirou (<email xlink:type="simple">stefanos.kalogirou@aua.gr</email>).</p>
        </fn>
        <fn fn-type="edited-by">
          <p>Academic editor: Editorial Secretary</p>
        </fn>
      </author-notes>
      <pub-date pub-type="collection">
        <year>2025</year>
      </pub-date>
      <pub-date pub-type="epub">
        <day>23</day>
        <month>12</month>
        <year>2025</year>
      </pub-date>
      <volume>11</volume>
      <elocation-id>e171663</elocation-id>
      <uri content-type="arpha" xlink:href="http://openbiodiv.net/93AA396C-6CC9-5155-BDD0-F73F74A7594E">93AA396C-6CC9-5155-BDD0-F73F74A7594E</uri>
      <uri content-type="zenodo_dep_id" xlink:href="https://zenodo.org/record/18052024">18052024</uri>
      <history>
        <date date-type="received">
          <day>10</day>
          <month>09</month>
          <year>2025</year>
        </date>
        <date date-type="accepted">
          <day>17</day>
          <month>12</month>
          <year>2025</year>
        </date>
      </history>
      <permissions>
        <copyright-statement>Iro Anastasopoulou, Konstantinos Kavakakis, Vasiliki Asimogiorgou, Foteini Iatrou, Dimitra Petza, Pierluigi Carbonara, George Tserpes, Francisco Alemany, Stefanos Kalogirou</copyright-statement>
        <license license-type="creative-commons-attribution" xlink:href="http://creativecommons.org/licenses/by/4.0/" xlink:type="simple">
          <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
        </license>
      </permissions>
      <abstract>
        <label>Abstract</label>
        <p><bold>Objective</bold>: The objective of this scoping review is to map and synthesize evidence on mitigation measures, fishing practices, and technologies to reduce endangered, threatened, and protected (ETP) species bycatch in drifting longline fisheries targeting large pelagics, summarize key concepts and findings across disciplines, and identify knowledge gaps to inform policy and research at a global scale.</p>
        <p><bold>Introduction</bold>: Drifting longline fisheries targeting large pelagic species continue to pose a significant conservation and management challenge for ETP species. Although various types of mitigation measures, fishing practices, and technologies have been developed and utilized globally to reduce ETP bycatch, the scope and nature of field-tested evidence remain diverse and scattered.</p>
        <p><bold>Inclusion criteria</bold>: Studies about regional measures adopted, and fishing practices and technologies tested in the field aimed at reducing ETP species in drifting longlines (LLD) for large pelagics. Both peer-reviewed and grey literature will be included. Studies published in English, Swedish, Norwegian, Greek, Spanish and Italian language and between the years 1990 and 2024 will be included. Studies related to other types of fishing gear, those that do not mention ETP species, or any type of evidence synthesis will be excluded.</p>
        <p><bold>Methods</bold>: This scoping review will be guided by the Joanna Briggs Institute (JBI) methodology. Scopus and Web of Science databases will be used and complemented with grey literature sources, i.e. organisational websites and a web-based search engine. A team of four reviewers will conduct the screening and the data extraction processes. EndNote software, Covidence software, Microsoft Excel and Flourish platform will be used for data management, screening, extraction and presentation of the outputs. The results will be presented both graphically and in tabular form.</p>
      </abstract>
      <kwd-group>
        <label>Keywords</label>
        <kwd>Bycatch reduction devices</kwd>
        <kwd>Fisheries policy</kwd>
        <kwd>Fisheries management</kwd>
        <kwd>Fishing gear innovation</kwd>
        <kwd>Marine biodiversity</kwd>
      </kwd-group>
      <counts>
        <fig-count count="0"/>
        <table-count count="1"/>
        <ref-count count="56"/>
      </counts>
    </article-meta>
    <notes>
      <sec sec-type="Funding program">
        <title>Funding program</title>
        <p>This scoping review is supported by Marine Stewardship Council (MSC) Ocean Stewardship Fund (OSF) for students, Grant number 2024-1321. The funders had no role in the design, conduct, or reporting of the review. The co-authors would like to thank the MSC for their generous support. Any opinions, findings and conclusions or recommendations expressed in this material are those of the authors and do not necessarily reflect those of the authors’ affiliated institutions.</p>
      </sec>
    </notes>
  </front>
  <body>
    <sec sec-type="Introduction">
      <title>Introduction</title>
      <p>Drifting longline (LLD) fisheries primarily targetting commercially important large pelagics, such as tuna and tuna-like species frequently report bycatch of non-target species. Bycatch includes incidental catch (species with commercial value) and discarded species (species with no economic value). Discarded species are often protected, and when released back to the sea, can frequently sustain significant injuries that lead to mortality (<xref ref-type="bibr" rid="B13452466">Santos et al. 2023</xref>). Of particular concern are vulnerable species affected by the LLD fishery, primarily elasmobranchs (especially pelagic sharks), sea turtles, seabirds, and marine mammals (<xref ref-type="bibr" rid="B13452492">Clarke et al. 2014</xref>). In marine fisheries, these species are collectively referred to as endangered, threatened, and protected (ETP) species. While there is a lack of a universally accepted and agreed-upon definition of ETP species, these are typically defined through multi-level legal and policy frameworks for conservation (<xref ref-type="bibr" rid="B13452503">Gray and Kennelly 2018</xref>). For this scoping review, ETP species will be identified using the IUCN Red List (<xref ref-type="bibr" rid="B13452525">IUCN 2012</xref>), CITES Appendix II (<xref ref-type="bibr" rid="B13452587">Convention on International Trade in Endangered Species of Wild Fauna and Flora 2023</xref>) and CMS Appendix II (<xref ref-type="bibr" rid="B13452601">Convention on the Conservation of Migratory Species of Wild Animals 2024</xref>).</p>
      <p>ETP species primarily interact with LLD fisheries through hooking (attracted to bait) or entanglement (<xref ref-type="bibr" rid="B13452466">Santos et al. 2023</xref>). These interactions not only threaten species’ survival but also cause economic losses for fishers due to depredation (consumption of fish or bait from the gear) (<xref ref-type="bibr" rid="B13452611">Fader et al. 2021</xref>).</p>
      <p>Pelagic LLD fisheries affect negatively several marine taxa, including seabirds, elasmobranchs, marine mammals, and sea turtles as discards (<xref ref-type="bibr" rid="B13452688">Carpentieri et al. 2021</xref>). Some elasmobranchs, including frequently captured species in LLD such as <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Prionace">Prionace</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="glauca">glauca</tp:taxon-name-part></tp:taxon-name></italic> (Linnaeus, 1758), <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Isurus">Isurus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="oxyrinchu">oxyrinchu</tp:taxon-name-part></tp:taxon-name></italic>s Rafinesque, 1810, <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Pseudocarcharias">Pseudocarcharias</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="kamoharai">kamoharai</tp:taxon-name-part></tp:taxon-name></italic> (Matsubara, 1936), <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Alopias">Alopias</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="superciliosus">superciliosus</tp:taxon-name-part></tp:taxon-name></italic> Lowe, 1841, <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Galeorhinus">Galeorhinus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="galeus">galeus</tp:taxon-name-part></tp:taxon-name></italic> (Linnaeus, 1758) and <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Carcharodon">Carcharodon</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="carcharias">carcharias</tp:taxon-name-part></tp:taxon-name></italic> (Linnaeus, 1758), are due to their biological traits (such as low reproductive potential, slow growth and late maturity) and highly migratory patterns sensitive to overfishing (<xref ref-type="bibr" rid="B13452701">Coelho et al. 2012</xref>, <xref ref-type="bibr" rid="B13452710">Cortés et al. 2009</xref>, <xref ref-type="bibr" rid="B13452725">Gallagher et al. 2014</xref>, <xref ref-type="bibr" rid="B13452734">Jordaan et al. 2020</xref>, <xref ref-type="bibr" rid="B13452761">Peristeraki et al. 2008</xref>). Seabirds, especially long-lived albatrosses and petrels, suffer annual mortalities of up to 160,000-320,000 individuals from longline interactions (<xref ref-type="bibr" rid="B13452770">Anderson et al. 2011</xref>, <xref ref-type="bibr" rid="B13452782">Jiménez et al. 2019</xref>, <xref ref-type="bibr" rid="B13452791">Lewison and Crowder 2003</xref>). Sea turtles, particularly leatherbacks <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Dermochelys">Dermochelys</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="coriacea">coriacea</tp:taxon-name-part></tp:taxon-name></italic> (Vandelli, 1761) and loggerheads <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Caretta">Caretta</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="caretta">caretta</tp:taxon-name-part></tp:taxon-name></italic> (Linnaeus, 1758), face similar threats (<xref ref-type="bibr" rid="B13452800">Lewison and Crowder 2007</xref>). In addition, odontocete cetaceans including false killer whales <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Pseudorca">Pseudorca</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="crassidens">crassidens</tp:taxon-name-part></tp:taxon-name></italic> (Owen, 1846), short-finned pilot whales <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Globicephala">Globicephala</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="macrorhynchus">macrorhynchus</tp:taxon-name-part></tp:taxon-name></italic> Gray, 1846, and Risso's dolphins <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Grampus">Grampus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="griseus">griseus</tp:taxon-name-part></tp:taxon-name></italic> (G. Cuvier, 1812) are also affected across various regions (<xref ref-type="bibr" rid="B13452611">Fader et al. 2021</xref>, <xref ref-type="bibr" rid="B13452809">Hamer et al. 2012</xref>, <xref ref-type="bibr" rid="B13452848">Macías López et al. 2012</xref>).</p>
      <p>The LLD fishery has in recent years developed positively towards reducing the interactions with ETP species through the adoption of measures driven by technological innovations and modifications in fishing practices (<xref ref-type="bibr" rid="B13452734">Jordaan et al. 2020</xref>). Among these innovations are various fishing technologies such as, bycatch reduction devices (BRDs) and gear modifications (<xref ref-type="bibr" rid="B13452867">Suuronen and Browman 2022</xref>). These innovations include bait modifications (e.g., blue dyed bait), hook designs (e.g., circle hooks), leader materials (e.g., nylon/monofilament alternatives) and deterrent systems (e.g., magnetic/acoustic devices, scaring lines) (<xref ref-type="bibr" rid="B13452876">Gilman et al. 2005</xref>, <xref ref-type="bibr" rid="B13452885">Gilman 2011</xref>, <xref ref-type="bibr" rid="B13452894">Gilman et al. 2016</xref>, <xref ref-type="bibr" rid="B13452903">Lucas and Berggren 2022</xref>). Some of these approaches can substantially decrease by-catch with low-cost investment, some of which with increased capture efficiency of target species (e.g. circle hook and albacore tuna) while in others, with decreased capture efficiency (e.g. circle hooks and swordfish) (<xref ref-type="bibr" rid="B13452466">Santos et al. 2023</xref>).</p>
      <p>Measures to reduce the interaction between ETP species and LLD fisheries are typically adopted through regulatory frameworks, time-area closures and standardized fishing practices (<xref ref-type="bibr" rid="B13452912">Sacchi 2021</xref>). These measures are adopted through specific management actions coordinated by Regional Fisheries Management Organizations (RFMOs). Contracting parties such as the European Union (EU) has integrated several of these measures in its legislation. In addition, LLD fisheries, encompass fishing practices with critical operational decisions including bait selection, numbers of hooks, soak time, operational time (including moon phase considerations), and LLD depth setting (<xref ref-type="bibr" rid="B13452922">Ward and Hindmarsh 2007</xref>).</p>
      <p>This scoping review aims to:</p>
      <p>
        <list list-type="bullet">
          <list-item>
            <p>map and summarize global data and evidence from real-life settings of mitigation measures adopted, and fishing practices and technologies tested, that reduce the interaction between ETP species and LLD fisheries targeting large pelagics.</p>
          </list-item>
          <list-item>
            <p>identify key concepts and summarize key findings</p>
          </list-item>
          <list-item>
            <p>identify the main gaps in the literature</p>
          </list-item>
        </list>
      </p>
      <p>A preliminary search in Scopus and Web of Science revealed no existing systematic or scoping reviews that comprehensively address mitigation measures, fishing practices, and technologies for ETP species in LLD. While several relevant reviews exist, they are limited in scope, focusing either on single ETP species (<xref ref-type="bibr" rid="B13452931">Avery et al. 2017</xref>, <xref ref-type="bibr" rid="B13452940">Gilman et al. 2006</xref>, <xref ref-type="bibr" rid="B13457412">Gilman and Huang 2016</xref>, <xref ref-type="bibr" rid="B13452987">Godin et al. 2012</xref>, <xref ref-type="bibr" rid="B13452809">Hamer et al. 2012</xref>, <xref ref-type="bibr" rid="B13452996">Løkkeborg 2003</xref>, <xref ref-type="bibr" rid="B13453005">Lucchetti and Sala 2010</xref>, <xref ref-type="bibr" rid="B13453014">Read 2007</xref>, <xref ref-type="bibr" rid="B13453023">Werner et al. 2015</xref>) or individual mitigation approaches such as circle hooks, bait modifications, or sensory deterrents (<xref ref-type="bibr" rid="B13453050">Graves et al. 2012</xref>, <xref ref-type="bibr" rid="B13453059">Kumar et al. 2016</xref>, <xref ref-type="bibr" rid="B13453068">Southwood et al. 2008</xref>, <xref ref-type="bibr" rid="B13453077">Yokota et al. 2012</xref>). Notably, one review in Japanese (<xref ref-type="bibr" rid="B13453113">Kiyota and Yokota 2010</xref>) could not be fully studied due to linguistic limitations, while another review examined post-capture handling practices across pelagic LLD and several ETP species (<xref ref-type="bibr" rid="B13453122">Zollett and Swimmer 2019</xref>). A recent meta-analysis evaluated gear modifications (hooks, bait, leaders) for teleosts, elasmobranchs, and sea turtles (<xref ref-type="bibr" rid="B13452466">Santos et al. 2023</xref>), but its narrow focus on specific technologies and species, differs from the broader objectives of this scoping review. The most comparable review (<xref ref-type="bibr" rid="B13453140">Swimmer et al. 2020</xref>) covers multiple ETP species (cetaceans, sea turtles, seabirds, sharks, and billfishes) but includes comparisons between purse seine fisheries and pelagic longlines.</p>
      <p>To cover the broad scope and nature of this study, including various measures, fishing practices, and technological solutions, we will use the JBI as a fit-for-purpose approach to systematically examine evidence, identify research gaps and provide direction for future research (<xref ref-type="bibr" rid="B13459787">Aromataris et al. 2024</xref>). The available evidence includes information from many locations and disciplines across the globe and includes studies on operational fishing practices (<xref ref-type="bibr" rid="B13453162">Melvin et al. 2014</xref>, <xref ref-type="bibr" rid="B13453172">Jiménez et al. 2020</xref>), gear modifications (<xref ref-type="bibr" rid="B13453186">Lima et al. 2023</xref>, <xref ref-type="bibr" rid="B13453199">Santos et al. 2019</xref>, <xref ref-type="bibr" rid="B13453211">Ward et al. 2008</xref>, <xref ref-type="bibr" rid="B13453220">Gilman et al. 2021</xref>) and innovative technologies (<xref ref-type="bibr" rid="B13453252">Sullivan et al. 2017</xref>). These studies collectively form the evidentiary foundation for a global scoping review on ETP species bycatch mitigation in LLD fisheries.</p>
      <p>The findings of this scoping review will bridge the fields of fisheries, environmental sciences, and policy, highlighting the need for effective bycatch management to protect ETP species while ensuring sustainable and capture-efficient fisheries.</p>
    </sec>
    <sec sec-type="Review question">
      <title>Review question</title>
      <p>The main question to be addressed by this scoping review is: What mitigation measures have been adopted, and what fishing practices and technologies have globally been tested in real-life fisheries settings to reduce the interactions between ETP species in drifting longline fisheries targeting large pelagics? Additional sub-questions that the review seeks to answer are:</p>
      <p>
        <list list-type="order">
          <list-item>
            <p>Which country/countries have mostly contributed to this research, and in which marine FAO fishing areas and fisheries has the science driven policy adoption?</p>
          </list-item>
          <list-item>
            <p>Which ETP species are most frequently reported from LLD fisheries in the literature?</p>
          </list-item>
          <list-item>
            <p>Which gear modifications in fishing practices and technologies have been mostly tested per ETP taxa?</p>
          </list-item>
        </list>
      </p>
    </sec>
    <sec sec-type="Inclusion criteria">
      <title>Inclusion criteria</title>
      <sec sec-type="Participants">
        <title>Participants</title>
        <p>The participants of this scoping review (ScR) are the ETP species. Within the framework of this review, ETP species are considered the species included in the IUCN Red List of Threatened Species (<xref ref-type="bibr" rid="B13452525">IUCN 2012</xref>), species listed in the Convention on International Trade in Endangered Species of wild fauna and flora appendices (CITES) (<xref ref-type="bibr" rid="B13452587">Convention on International Trade in Endangered Species of Wild Fauna and Flora 2023</xref>) and species listed in the appendices of the Convention on the Conservation of Migratory Species of wild animals (CMS) (<xref ref-type="bibr" rid="B13452601">Convention on the Conservation of Migratory Species of Wild Animals 2024</xref>). More specifically, the IUCN Red List include three categories of species, collectively referred to as "threatened" species, classified i.e. critically endangered (CR), endangered (EN) and vulnerable (VU) (<xref ref-type="bibr" rid="B13452525">IUCN 2012</xref>). Additionally, species listed in Appendix I and II of CITES (<xref ref-type="bibr" rid="B13452587">Convention on International Trade in Endangered Species of Wild Fauna and Flora 2023</xref>) and in Appendix II of CMS (<xref ref-type="bibr" rid="B13452601">Convention on the Conservation of Migratory Species of Wild Animals 2024</xref>), are all considered as ETP species for this ScR. Studies on measures, practices and/or technologies on target species capture efficiency and other associated factors (e.g. yield) that do not specifically mention an ETP species will be excluded.</p>
      </sec>
      <sec sec-type="Concept">
        <title>Concept</title>
        <p>All types of management measures, including fishing practices and technologies, that aim to reduce the interaction of ETP species with LLD fisheries constitute the concept of this ScR. Mitigation measures adopted by tuna RFMOs (Commission for the Conservation of Southern Bluefin Tuna, CCSBT; Indian Ocean Tuna Commission IOTC; International Commission for the Conservation of Atlantic Tunas ICCAT; The Inter-American Tropical Tuna Commission IATTC; and Western and Central Pacific Fisheries Commission WCPFC) to reduce ETP species bycatch in LLD will be included, while national measures will be excluded. Examples of such measures are international regulations, agreements, time-area closures, quotas and gear restrictions adopted by tuna RFMOs e.g., ICCAT etc. Finally, only in-force/active measures will be considered to ensure the findings are updated and scientifically justified to current management practices and policy decisions.</p>
        <p>For fishing practices, this ScR will include studies that contribute to the reduction of the interaction with ETP species and LLD fisheries, such as changes in fishing operations (e.g., set time, depth setting, bait type, soak time, haul-back time, handling and release practices, post-capture handling of ETP species, etc.).</p>
        <p>For fishing technologies, this ScR will include studies designed to reduce ETP species interaction with LLD fisheries, such as hook modifications (circle hooks, magnetic hooks), bait alternatives (artificial bait, coloured bait), gear modifications (weighted lines, bird-scaring lines), and acoustic, visual, or electronic deterrents (LED lights, pingers).</p>
        <p>For both fishing practices and fishing technologies, only field-tested studies will be included. Finally, studies focusing on other gear types such as bottom longlines, gillnets, trammel nets, purse seiners, or trawls will be excluded. Additionally, research from recreational, or sports fisheries will not be included.</p>
      </sec>
      <sec sec-type="Context">
        <title>Context</title>
        <p>This ScR will include studies in marine environments where LLD fisheries operate. The ScR will focus on LLD fisheries targeting large pelagics, including swordfish <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Xiphias">Xiphias</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="gladius">gladius</tp:taxon-name-part></tp:taxon-name></italic> Linnaeus, 1758, tunas e.g., albacore <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Thunnus">Thunnus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="alalunga">alalunga</tp:taxon-name-part></tp:taxon-name></italic> (Bonnaterre, 1788), bluefin tuna <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Thunnus">Thunnus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="thynnus">thynnus</tp:taxon-name-part></tp:taxon-name></italic> (Linnaeus, 1758), yellowfin tuna <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Thunnus">Thunnus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="albacares">albacares</tp:taxon-name-part></tp:taxon-name></italic> (Bonnaterre, 1788), bigeye tuna <italic><tp:taxon-name><tp:taxon-name-part taxon-name-part-type="genus" reg="Thunnus">Thunnus</tp:taxon-name-part> <tp:taxon-name-part taxon-name-part-type="species" reg="obesus">obesus</tp:taxon-name-part></tp:taxon-name></italic> (Lowe, 1839), and marlins. Studies from any geographic location worldwide will be considered.</p>
      </sec>
      <sec sec-type="Types of sources">
        <title>Types of sources</title>
        <p>This ScR considers research studies published in peer-reviewed journals (e.g. research articles, field studies, experimental studies, etc) and grey literature (e.g. organisational websites, technical reports, guidelines, documents, etc.). All forms of secondary research, such as review articles and evidence syntheses (e.g. systematic reviews, scoping reviews, rapid reviews, meta-analyses, umbrella reviews, literature reviews, etc.) will be excluded to prevent duplication of evidence. Chronologically, the literature search will cover the years between 1990 and 2024, to ensure the review captures most recent developments in bycatch mitigations since bycatch issues started to appear in the scientific literature (<xref ref-type="bibr" rid="B13453273">Soykan et al. 2008</xref>). No search limitations will be applied regarding subject area, publication stage, document type or source type. Studies in languages other than English, Swedish, Norwegian, Greek, Spanish and Italian will be excluded to meet authors’ language competence, a limitation which may affect outcomes from the grey literature.</p>
      </sec>
    </sec>
    <sec sec-type="Methods">
      <title>Methods</title>
      <p>The proposed scoping review will be conducted in accordance with the JBI methodology for scoping reviews (<xref ref-type="bibr" rid="B13459787">Aromataris et al. 2024</xref>). The preferred reporting items for systematic reviews and meta-analyses extension for scoping reviews, PRISMA-ScR (<xref ref-type="bibr" rid="B13453284">Tricco et al. 2018</xref>) will be used to improve the transparency and completeness of this ScR. The JBI SUMARI (Joanna Briggs Institute System for the Unified Management, Assessment and Review of Information) software (<xref ref-type="bibr" rid="B13453317">JBI SUMARI 2004</xref>) will be used to develop the protocol. To ensure transparency, any deviations from the protocol will be detailed in the final ScR report.</p>
      <sec sec-type="Search strategy">
        <title>Search strategy</title>
        <p>The search strategy will aim to identify both peer-reviewed and grey literature. A three-step search strategy will be applied in this review. Firstly, an initial limited search in Scopus will be undertaken to identify articles on the topic, keywords and index terms. Secondly, the text words contained in the titles and abstracts of relevant articles, and the index terms used to describe the articles, will be used to develop a full search strategy for Scopus (see Suppl. material <xref ref-type="supplementary-material" rid="S13456675">1</xref>). This full search strategy will form the basis for developing search strategies for other databases and/or information sources. Thirdly, the reference lists of all included sources of evidence will also be screened to identify additional studies that aligns with the inclusion and exclusion criteria of this ScR.</p>
        <p>The scientific databases to be searched include Scopus and Web of Science Core Collection. Sources of unpublished studies and grey literature include the web-based search engine Google Search and organisational websites (e.g. ICCAT, FAOLEX, FAO Knowledge Repository BETA). For web-based search, a screening limit of the first five pages will be set and will include keyword combinations that match the aim of this study. This approach is expected to substantially improve the efficiency in management of both time and volume of grey literature, as also recommended by the JBI methodology (<xref ref-type="bibr" rid="B13459787">Aromataris et al. 2024</xref>). The full three-step search strategy will be presented in the final review article.</p>
      </sec>
      <sec sec-type="Study/Source of evidence selection">
        <title>Study/Source of evidence selection</title>
        <p>Following the search strategy, all identified citations will be collated and uploaded into EndNote 20.6 (Clarivate Analytics) (<xref ref-type="bibr" rid="B13453336">Clarivate 2023</xref>) and duplicates will be removed. Four reviewers will take part in the screening process of this ScR. Prior to the screening process, a pilot test of the sources for evidence selection will be conducted, the framework of which is recommended by the JBI methodology (<xref ref-type="bibr" rid="B13459787">Aromataris et al. 2024</xref>). The pilot testing includes 20 random samples of titles/abstracts and screened by each of the four reviewers, following eligibility criteria set in this protocol. This process will enable reviewers to consider any necessary modifications needed in the eligibility criteria. The screening will commence after the reviewers have reached an agreement of &gt;75%. Once an agreement has been reached, the four reviewers will proceed for a full screening process of all articles, including titles and abstracts which will be assessed against the final inclusion criteria (see section Inclusion Criteria; Table <xref ref-type="table" rid="T13452432">1</xref>). The four reviewers will be divided into groups of two to facilitate the screening process. All sources that meet the inclusion criteria, together with their full reference, will be imported into the Covidence Systematic Review Software (<xref ref-type="bibr" rid="B13453382">Covidence 2025</xref>). As a next step, the full text will be assessed in detail against the inclusion criteria by each of the reviewers. Reasons for excluding sources of evidence at full text not meeting the inclusion criteria will be recorded and reported in the scoping review paper. Any disagreements that arise between the reviewers during the selection process, will be resolved through discussion, or by inviting an additional independent reviewer. The results of the search strategy and the inclusion/exclusion process will be presented in the final scoping review as a preferred reporting items for systematic reviews and meta-analyses extension for scoping reviews (PRISMA-ScR) flow diagram (<xref ref-type="bibr" rid="B13453284">Tricco et al. 2018</xref>).</p>
      </sec>
      <sec sec-type="Data extraction">
        <title>Data extraction</title>
        <p>Data will be extracted from documents included in the scoping review by four independent reviewers using a data extraction tool, such as a charting table (Suppl. material <xref ref-type="supplementary-material" rid="S13456676">2</xref>). The data extracted will include specific details about the participants, concept, context, study methods and key findings relevant to the review question.</p>
        <p>To promote consistency and support collaboration and communication among reviewers, the data extraction tool will be incorporated into the Covidence systematic review management software (<xref ref-type="bibr" rid="B13453382">Covidence 2025</xref>). The extraction mode of Covidence will be used by four reviewers, i.e. two reviewers will extract relevant data based on our data extraction tool for each study. Any disagreements that arise between the reviewers will be resolved through discussion, or with an additional reviewer/s. The data extraction tool may be modified during the data extraction process if additional information is considered crucial for the scope of this study and detailed in the scoping review. If necessary, authors of papers will be contacted to request missing or additional data.</p>
      </sec>
      <sec sec-type="Data analysis and presentation">
        <title>Data analysis and presentation</title>
        <p>The evidence presented in the final review paper will directly respond to the review objective and questions. The data will be presented graphically and in tabular form. Features of Microsoft Excel (<xref ref-type="bibr" rid="B13460285">Microsoft Corporation 2025</xref>) and Flourish (<xref ref-type="bibr" rid="B13460269">Flourish, Canva UK Operations Ltd. 2025</xref>) will be used to visualize and present the data. A narrative summary will accompany the tabulated and/or charted results, describing how the results relate to the review's objective and review question. We aim to use parametric and non-parametric tests to statistically justify outcomes.</p>
      </sec>
    </sec>
  </body>
  <back>
    <ack>
      <title>Acknowledgements</title>
      <p>The authors would like to thank Antigoni Foutsi from MSC for informing us for the possibility of submitting proposals to the Ocean Stewardship Fund (OSF) of MSC.</p>
    </ack>
    <sec sec-type="Author contributions">
      <title>Author contributions</title>
      <p>IA led the writing, editing and reviewing process, acquired funding, designed the search strategy and data extraction tool. KK, VA, FI contributed to writing, editing, reviewing. DP provided supervision, contributed to writing, editing, reviewing. PC, GT, and FA contributed to writing. SK conceived the study, provided supervision, acquired funding, contributed to writing, editing, reviewing. All authors contributed equally to the approval of the final protocol.</p>
    </sec>
    <sec sec-type="Conflicts of interest">
      <title>Conflicts of interest</title>
      <p>No conflict of interest to declare</p>
      <p>Disclaimer: This article is (co-)authored by any of the Editors-in-Chief, Managing Editors or their deputies in this journal.</p>
    </sec>
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          <pub-id pub-id-type="doi">10.5343/bms.2011.1066</pub-id>
        </element-citation>
      </ref>
      <ref id="B13453122">
        <element-citation publication-type="article">
          <person-group person-group-type="author">
            <name name-style="western">
              <surname>Zollett</surname>
              <given-names>EA</given-names>
            </name>
            <name name-style="western">
              <surname>Swimmer</surname>
              <given-names>Y</given-names>
            </name>
          </person-group>
          <year>2019</year>
          <article-title>Safe handling practices to increase post-capture survival of cetaceans, sea turtles, seabirds, sharks, and billfish in tuna fisheries</article-title>
          <source>Endangered Species Research</source>
          <volume>38</volume>
          <fpage>115</fpage>
          <lpage>125</lpage>
          <pub-id pub-id-type="doi">10.3354/esr00940</pub-id>
        </element-citation>
      </ref>
    </ref-list>
  </back>
  <floats-group>
    <table-wrap id="T13452432" position="float" orientation="portrait">
      <label>Table 1.</label>
      <caption>
        <p>Inclusion and exclusion criteria for the Scoping Review based on the "Participants, Concept and Context, PCC" mnemonic.</p>
      </caption>
      <table rules="all" border="1">
        <tbody>
          <tr>
            <td rowspan="1" colspan="2"/>
            <td rowspan="1" colspan="1">
              <bold>Inclusion criteria</bold>
            </td>
            <td rowspan="1" colspan="1">
              <bold>Exclusion criteria</bold>
            </td>
          </tr>
          <tr>
            <td rowspan="1" colspan="1">
              <bold>PARTICIPANTS</bold>
            </td>
            <td rowspan="1" colspan="1">
              <bold>Endangered, Threatened, and Protected (ETP) species as defined by:- IUCN Red List (CR, EN, VU)- CITES Appendix II- CMS Appendix IIIf a species meets one or more of these, it is considered ETP</bold>
            </td>
            <td rowspan="1" colspan="1">- Studies focusing on ETP species</td>
            <td rowspan="1" colspan="1">- Studies on measures, practices, or technologies that do not include ETP species</td>
          </tr>
          <tr>
            <td rowspan="1" colspan="1">
              <bold>CONCEPT</bold>
            </td>
            <td rowspan="1" colspan="1">
              <bold>Regional mitigation measures, fishing practices, and technologies aimed at reducing ETP species interaction with LLD on a global scale</bold>
            </td>
            <td rowspan="1" colspan="1">- Mitigation measures adopted by tuna RFMOs to reduce ETP species bycatch in LLD<break/>- Only in-force/active measures<break/>- Fishing practices that reduce ETP interaction (e.g., set time, depth setting, bait type, soak time, haulback time, handling and release, post-capture handling)<break/>- Technologies specifically designed for ETP species reduction in LLD (e.g., hook modifications, bait alternatives, gear modifications, deterrents)<break/>- Only field-tested practices and technologies included</td>
            <td rowspan="1" colspan="1">- Measures, practices, or technologies related to other types of longline fisheries (such as bottom longlines) or other gear types (gillnets, trammel nets, purse seiners, trawls)<break/>- National measures<break/>- Non-field-tested (theoretical, conceptual, or lab-based) practices/technologies<break/>- Studies about recreational, or sports fisheries</td>
          </tr>
          <tr>
            <td rowspan="1" colspan="1">
              <bold>CONTEXT</bold>
            </td>
            <td rowspan="1" colspan="1">
              <bold>Drifting longline fisheries (LLD) targeting large pelagic species</bold>
            </td>
            <td rowspan="1" colspan="1">- Studies conducted in marine environments where LLD fisheries operate<break/>- Evidence about large pelagic species (e.g., swordfish, tuna, billfishes)<break/>- Studies from any geographic location</td>
            <td rowspan="1" colspan="1"/>
          </tr>
          <tr>
            <td rowspan="1" colspan="2">
              <bold>EVIDENCE TYPES &amp; SOURCES</bold>
            </td>
            <td rowspan="1" colspan="1">- Peer-reviewed research studies (articles, field studies, experimental studies) from literature databases<break/>- Selected grey literature (organizational websites, technical reports, guidelines, etc.)<break/>- Literature from 1990 to 2024<break/>- Studies published in English, Swedish, Norwegian, Greek, Spanish and Italian<break/>- No limitations on subject area, publication stage, document or source type</td>
            <td rowspan="1" colspan="1">- Theoretical, conceptual, or laboratory-only studies<break/>- Secondary research, review articles, systematic or scoping or rapid or meta or umbrella or literature reviews<break/>- Studies before 1990 or after 2024</td>
          </tr>
        </tbody>
      </table>
    </table-wrap>
    <supplementary-material id="S13456675" orientation="portrait" position="float" xlink:type="simple">
      <object-id content-type="arpha">C11E70C6-ECD1-5A90-86E4-1E59BF16B513</object-id>
      <object-id content-type="doi">10.3897/rio.11.e171663.suppl1</object-id>
      <object-id content-type="zenodo_dep_id">18052152</object-id>
      <label>Supplementary material 1</label>
      <caption>
        <p>Search strategy</p>
      </caption>
      <statement content-type="dataType">
        <label>Data type</label>
        <p>Search strategy</p>
      </statement>
      <statement content-type="notes">
        <label>Brief description</label>
        <p>The entire search strategy (query string) applied in Scopus at 21 July 2025 and search results (number of articles retrieved).</p>
      </statement>
      <p>File: oo_1401675.docx</p>
      <media xlink:href="rio-11-e171663-s001.docx" mimetype="Microsoft Word Document" mime-subtype="docx" position="float" orientation="portrait" xlink:type="simple">
        <uri content-type="original_file">https://binary.pensoft.net/file/1401675</uri>
      </media>
      <attrib specific-use="authors">Iro Anastasopoulou, Konstantinos Kavakakis, Vasiliki Asimogiorgou, Foteini Iatrou, Dimitra Petza, Pierluigi Carbonara, George Tserpes, Francisco Alemany, Stefanos Kalogirou</attrib>
    </supplementary-material>
    <supplementary-material id="S13456676" orientation="portrait" position="float" xlink:type="simple">
      <object-id content-type="arpha">D05CD2EF-7416-5A2A-A2B9-369D9D7E3617</object-id>
      <object-id content-type="doi">10.3897/rio.11.e171663.suppl2</object-id>
      <object-id content-type="zenodo_dep_id">18052154</object-id>
      <label>Supplementary material 2</label>
      <caption>
        <p>Data extraction instrument</p>
      </caption>
      <statement content-type="dataType">
        <label>Data type</label>
        <p>Data extraction tool</p>
      </statement>
      <statement content-type="notes">
        <label>Brief description</label>
        <p>A charting table aligned to the objective and the questions of the ScR, including specific details about the participants, concept, context, relevant to the review objective.</p>
      </statement>
      <p>File: oo_1401677.xlsx</p>
      <media xlink:href="rio-11-e171663-s002.xlsx" mimetype="Microsoft Excel Document" mime-subtype="xlsx" position="float" orientation="portrait" xlink:type="simple">
        <uri content-type="original_file">https://binary.pensoft.net/file/1401677</uri>
      </media>
      <attrib specific-use="authors">Iro Anastasopoulou, Konstantinos Kavakakis, Vasiliki Asimogiorgou, Foteini Iatrou, Dimitra Petza, Pierluigi Carbonara, George Tserpes, Francisco Alemany, Stefanos Kalogirou</attrib>
    </supplementary-material>
  </floats-group>
</article>
