Report on the Marine Imaging Workshop 2017

Timm Schoening; Jennifer Durden; Inken Preuss; Alexandra Branzan Albu; Autun Purser; Bart De Smet; Carlos Dominguez-Carrió; Chris Yesson; Daniëlle  de Jonge; Dhugal Lindsay; Jan Schulz; Klas Ove Möller; Kolja Beisiegel; Linda Kuhnz; Maia Hoeberechts; Nils Piechaud; Stephanie Sharuga; Tali Treibitz

doi:10.3897/rio.3.e13820

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Workshop Report

Research Ideas and Outcomes 3: e13820
https://doi.org/10.3897/rio.3.e13820 (06 Jun 2017)

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Jennifer M. Durden, Jessica Y. Luo, Harriet Alexander, Alison M. Flanagan, Lars Grossmann (2017)
Integrating “Big Data” into Aquatic Ecology: Challenges and Opportunities. Limnology and Oceanography Bulletin 26: 101.

DOI: 10.1002/lob.10213

Nils Piechaud, Kerry L. Howell (2022)
Fast and accurate mapping of fine scale abundance of a VME in the deep sea with computer vision. Ecological Informatics 71: 101786.

DOI: 10.1016/j.ecoinf.2022.101786

K Beisiegel, A Darr, ML Zettler, R Friedland, U Gräwe, M Gogina (2020)
Spatial variability in subtidal hard substrate assemblages across horizontal and vertical gradients: a multi-scale approach using seafloor imaging. Marine Ecology Progress Series 633: 23.

DOI: 10.3354/meps13168

Timm Schoening, Jennifer M. Durden, Claas Faber, Janine Felden, Karl Heger, Henk-Jan T. Hoving, Rainer Kiko, Kevin Köser, Christopher Krämmer, Tom Kwasnitschka, Klas Ove Möller, David Nakath, Andrea Naß, Tim W. Nattkemper, Autun Purser, Martin Zurowietz (2022)
Making marine image data FAIR. Scientific Data 9: .

DOI: 10.1038/s41597-022-01491-3

Martin Vodopivec, Rok Mandeljc, Tihomir Makovec, Alenka Malej, Matej Kristan (2018)
Towards automated scyphistoma census in underwater imagery: A useful research and monitoring tool. Journal of Sea Research 142: 147.

DOI: 10.1016/j.seares.2018.09.014

Kolja Beisiegel, Alexander Darr, Michael L. Zettler, René Friedland, Ulf Gräwe, Mayya Gogina (2018)
Understanding the spatial distribution of subtidal reef assemblages in the southern Baltic Sea using towed camera platform imagery. Estuarine, Coastal and Shelf Science 207: 82.

DOI: 10.1016/j.ecss.2018.04.006

Luisa Federwisch, Dorte Janussen, Claudio Richter (2020)
Macroscopic characteristics facilitate identification of common Antarctic glass sponges (Porifera, Hexactinellida, Rossellidae). Polar Biology 43: 91.

DOI: 10.1007/s00300-019-02612-2

N Piechaud, C Hunt, PF Culverhouse, NL Foster, KL Howell (2019)
Automated identification of benthic epifauna with computer vision. Marine Ecology Progress Series 615: 15.

DOI: 10.3354/meps12925

Kerry L. Howell, Jaime S. Davies, A. Louise Allcock, Andreia Braga-Henriques, Pål Buhl-Mortensen, Marina Carreiro-Silva, Carlos Dominguez-Carrió, Jennifer M. Durden, Nicola L. Foster, Chloe A. Game, Becky Hitchin, Tammy Horton, Brett Hosking, Daniel O. B. Jones, Christopher Mah, Claire Laguionie Marchais, Lenaick Menot, Telmo Morato, Tabitha R. R. Pearman, Nils Piechaud, Rebecca E. Ross, Henry A. Ruhl, Hanieh Saeedi, Paris V. Stefanoudis, Gerald H. Taranto, Michael B. Thompson, James R. Taylor, Paul Tyler, Johanne Vad, Lissette Victorero, Rui P. Vieira, Lucy C. Woodall, Joana R. Xavier, Daniel Wagner, Vincent Lecours (2019)
A framework for the development of a global standardised marine taxon reference image database (SMarTaR-ID) to support image-based analyses. PLOS ONE 14: e0218904.

DOI: 10.1371/journal.pone.0218904

Daniel Mietchen, Lyubomir Penev, Teodor Georgiev, Boriana Ovcharova, Iva Kostadinova (2021)
Open science in practice: 300 published research ideas and outcomes illustrate how RIO Journal facilitates engagement with the research process. Research Ideas and Outcomes 7: .

DOI: 10.3897/rio.7.e68595

Autun Purser, Ulrich Hoge, Johannes Lemburg, Yasemin Bodur, Elena Schiller, Janine Ludszuweit, Jens Greinert, Simon Dreutter, Boris Dorschel, Frank Wenzhöfer (2020)
PlasPI marine cameras: Open-source, affordable camera systems for time series marine studies. HardwareX 7: e00102.

DOI: 10.1016/j.ohx.2020.e00102

Kolja Beisiegel, Franz Tauber, Mayya Gogina, Michael L. Zettler, Alexander Darr (2019)
The potential exceptional role of a small Baltic boulder reef as a solitary habitat in a sea of mud. Aquatic Conservation: Marine and Freshwater Ecosystems 29: 321.

DOI: 10.1002/aqc.2994

Timm Schoening, Kevin Köser, Jens Greinert (2018)
An acquisition, curation and management workflow for sustainable, terabyte-scale marine image analysis. Scientific Data 5: .

DOI: 10.1038/sdata.2018.181

Catherine Borremans, Jennifer Durden, Timm Schoening, Emma Curtis, Luther Adams, Alexandra Branzan Albu, Aurélien Arnaubec, Sakina-Dorothée Ayata, Reshma Baburaj, Corinne Bassin, Miriam Beck, Katharine Bigham, Rachel Boschen-Rose, Chad Collett, Matteo Contini, Paulo Correa, Carlos Dominguez-Carrió, Gautier Dreyfus, Graeme Duncan, Maxime Ferrera, Valentin Foulon, Ariell Friedman, Santosh Gaikwad, Chloe Game, Adriana Gaytán-Caballero, Fanny Girard, Michela Giusti, Mélissa Hanafi-Portier, Kerry Howell, Iryna Hulevata, Kiamuke Itiowe, Chris Jackett, Jan Jansen, Clarissa Karthäuser, Kakani Katija, Maxime Kernec, Gabriel Kim, Marcelo Kitahara, Daniel Langenkämper, Tim Langlois, Nadine Lanteri, Claude Jianping Li, Qi-Ran Li, Pierre-Olivier Liabot, Dhugal Lindsay, Ali Loulidi, Yann Marcon, Simone Marini, Ashley Marranzino, Miquel Massot-Campos, Marjolaine Matabos, Lenaick Menot, Bernabé Moreno, Marcus Morrissey, David Nakath, Tim Nattkemper, Monika Neufeld, Matthias Obst, Karine Olu, Alexa Parimbelli, Francesca Pasotti, Dominique Pelletier, Margaux Perhirin, Nils Piechaud, Oscar Pizarro, Autun Purser, Clara Rodrigues, Elena Ceballos Romero, Brian Schlining, Yifan Song, Heidi Sosik, Marc Sourisseau, Bastien Taormina, Jan Taucher, Blair Thornton, Loïc Van Audenhaege, Charles von der Meden, Guillaume Wacquet, Jack Williams, Kea Witting, Martin Zurowietz (2024)
Report on the Marine Imaging Workshop 2022. Research Ideas and Outcomes 10: .

DOI: 10.3897/rio.10.e119782

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